| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_11560 |
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| Symbol | |
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| ID | 7312901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 1248344 |
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| End bp | 1249513 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643611594 |
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| Product | LL-diaminopimelate aminotransferase |
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| Protein accession | YP_002508903 |
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| Protein GI | 220931995 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03540] LL-diaminopimelate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAAATG CTGATAGAAT TAAAAACCTG CCGCCATATT TATTCGCAGA AATTGATAAA
ATGATTGCCA GAGCAAAAAA AGAGGGAGTA GATGTAATCA GTTTCGGAAT TGGAGATCCG
GATCAACCAA CACCTGATAA TATAATAAAT AAAATGATAG AGGCTGTTAA AGACCCTTCT
ACTCACAGTT ACCCCTCTTA TGAAGGGATG TATGAATACC GTAAAACAGT TGCTGACTGG
TATAAAAATA ACTATGGTAG GGAGTTAGAT CCTGATAAAG AGGTTGTTTC TTTAATTGGT
TCTAAAGAGG GGATAGCCCA TCTTCCTTTT TGTTATATAA ACCCCGGTGA TATAGCCCTT
GTACCTGATC CCGGGTATCC TGTCTATAAG ACTTCAGTTT TGCTGGCAGG AGGAAAACCG
GTTCAGGTTC CATTAGTTGA AGAAAATAAT TTCCTACCTG ACCTTAAAGC AATCGATGAA
GATATCGCCA GAAAAGCTAA ACTCTTTTTT ATAAACTATC CCAACAATCC GACCGGGGCA
ATTGCTCCTG AGGAGTTTTA TGAAGAATTG ATTGATTTTG CCGATAAATA TGATATAATA
ATTGCCCATG ATGCCGCCTA TAGTGAAATT GGCCTTGATG GATATAATCC TCCCAGTTTT
ATGCAGTTTG AAGGAGCAAA AAAGGTTGGC ATCGAATTTA ATTCTCTTTC CAAACCCTTT
AATATGACCG GCTGGAGAGT AGGCTGGGCA GTTGGTCGTT CTGATGTGAT AGAATCTTTA
GGAAGAATCA AAACAAACAT TGATTCCGGT ATATTTGAAG CTATTCAGTA TGCTGGAATT
GAAGCCCTGA CAGGCCCTGA AGATAATATT GAAAAAATGA CAGAATTATA TTCTAAAAGG
AGAGACTTAC TGGTAGAAGG CCTGCGTGAA CTGGGCTGGG AAGTCCCTGT AAATAAAGCC
ACCTTCTATA TCTGGGCTAA AGTACCTGAA GGCTATAATT CCACTGAATT CTCCACACAT
GTTTTTGAAA AAACCGGGAT ATTCTTTACA CCCGGTAATG GTTACGGGGA ATTCGGTGAA
GGGTATGTCA GAATTGCATT AACAGTAACA GAAGAGCGTA TAAAAGAAGC TTTAGAAAGA
CTTAAAAATA GTGATATAAA ATTTAAATAA
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| Protein sequence | MENADRIKNL PPYLFAEIDK MIARAKKEGV DVISFGIGDP DQPTPDNIIN KMIEAVKDPS
THSYPSYEGM YEYRKTVADW YKNNYGRELD PDKEVVSLIG SKEGIAHLPF CYINPGDIAL
VPDPGYPVYK TSVLLAGGKP VQVPLVEENN FLPDLKAIDE DIARKAKLFF INYPNNPTGA
IAPEEFYEEL IDFADKYDII IAHDAAYSEI GLDGYNPPSF MQFEGAKKVG IEFNSLSKPF
NMTGWRVGWA VGRSDVIESL GRIKTNIDSG IFEAIQYAGI EALTGPEDNI EKMTELYSKR
RDLLVEGLRE LGWEVPVNKA TFYIWAKVPE GYNSTEFSTH VFEKTGIFFT PGNGYGEFGE
GYVRIALTVT EERIKEALER LKNSDIKFK
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