Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_11080 |
Symbol | |
ID | 7312853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 1202417 |
End bp | 1203349 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 643611547 |
Product | phage integrase family protein |
Protein accession | YP_002508856 |
Protein GI | 220931948 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0105178 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAACA ATGTTGAATA TTTAAATGCA GTAAAAAGTT TTAAAAAATA TTTAGCAACA GAAAGGGGTT ATTCCCCTCT AACTGTAAAG GAATATGAAC GGGATTTAAA CCTCTTTTAT ATTTATCTAA CCAATGAGAT GGGCTTTAAA AATGACTTTT CTCTAGATAA AATTAATAAA TACCATATAG CTGAATTTTT AGGTGATACT ATCTTGGTCC ATGACAATGC CCCCACCACC AGAAACCGCA AACTCTATTC AATTAGATCC TTTTTTAAAT TTCTTGTAAA ATATGAATAC ATAAAAGTCA ATCCAGCAGC CACCATTGAA GCCAGTAAAA CAGAAGTCAG AGCCGAACCT ATTTATATGA AGCTTAATGA CGCCCAGAAG TATATAGAAA CAATAAAAAA GCACGGAGGG GTTAACTTAA AAAGGGATCT GGCTATAGTA AAGCTCTTTC TCTATGCAGG TTTACGGGTT TCAGAACTTG TTGGACTTGA TCTGGATGAT ATTGATTTTA AGGACCAGTC AATTAAATTC TATGGAAAAG GAAAAAAGGA GAGGTATGTA CCTCTCCATC CTGATGTAAT TATGTCTATT AAAAATTATT TCCCTGAACG TAATGAAATT CAACCCAAAA ATGAAGATGC TATTAAGGCC CTGTTTTTAT CCAGACATGG TAAAAGAATA AGTGTTAGGA CCATTCAGAT GATGGTTAAA AAATACGCTA AACTGGCCGG TGTAAAAAAT GCTGATAAAA TAACACCACA CAAACTCAGG CATACTTTTG CTTCCCTACT ATATCATAAG ACAAAAGACT TAAAAATTTT GCAGGATTTA CTGGGGCATG CCGATATTTC AACTACCCAG ATATATACAC ATACCGATGT CAAACAGAGA AAAAAAGCCA TAAAGGAACT TCCGGATTTC TAA
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Protein sequence | MANNVEYLNA VKSFKKYLAT ERGYSPLTVK EYERDLNLFY IYLTNEMGFK NDFSLDKINK YHIAEFLGDT ILVHDNAPTT RNRKLYSIRS FFKFLVKYEY IKVNPAATIE ASKTEVRAEP IYMKLNDAQK YIETIKKHGG VNLKRDLAIV KLFLYAGLRV SELVGLDLDD IDFKDQSIKF YGKGKKERYV PLHPDVIMSI KNYFPERNEI QPKNEDAIKA LFLSRHGKRI SVRTIQMMVK KYAKLAGVKN ADKITPHKLR HTFASLLYHK TKDLKILQDL LGHADISTTQ IYTHTDVKQR KKAIKELPDF
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