Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_10420 |
Symbol | |
ID | 7314630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 1130371 |
End bp | 1131132 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 643611481 |
Product | two component transcriptional regulator, LytTR family |
Protein accession | YP_002508793 |
Protein GI | 220931885 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3279] Response regulator of the LytR/AlgR family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000000000460621 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATGC AGGCTTTAGT AGTTGACGAT GAAGCACCGG CCAGAAATGA GTTAATATTT ATGCTTGAAA ATAGTAAGGT TAATTTCCGG GTCAGGGAGG CAGATAATGG GAAAAAAGCC CTTGAGCTTG TAAATAATCA TAATTTTGAT GTGATTTTCC TGGATATTCA GATGCCTTCT TTAACCGGAC TGGAAGTAGC TGCTGAAATT CTTAAGGTGG AGGATAAACC TGAAATTGTT TTTGTTACAG CTTATGATGA ATATGCTATT AAGGCTTTTG AATTAAATGC TGTTGATTAT TTACTGAAGC CATTTTCCAG GAAGCGTTTT GAGGAAACCA TTAACCGGGT AATGAGTCAT TCAAAAAAAG ATAGAATAAA AGATACTATA AAAATAAATA AGGCTATTTC CCAATTAACC CCGGAATTAA AAAGGATACC GGTAAATTCA AAACGGGGAC GGATTAAGTT ATTAAAACCT TCAGAGATTT ACTATGCCAC AACTGAAGGG GGTAAGGTCT TTATAACATC TGAAGAGGGT GTATTTGAGT TTGCTAATGG ATTAAAGGAG CTTGAAGAAA TGTTAAACCT GCCCCAATTT TTTAGATGCC ATCGAAGTTA CCTTGTTAAT CTGTCTAAAG TAAAAGAACT GATTCCCTGG TTTAAAGGAA ATTATTATCT TATTATTAAT GATGAAAGTG AAGAGGAAAT TCCGGTAGGG AGAACCAGGG TGAACGAGTT AAAGAAAAAA TTAAATTTAT AG
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Protein sequence | MEMQALVVDD EAPARNELIF MLENSKVNFR VREADNGKKA LELVNNHNFD VIFLDIQMPS LTGLEVAAEI LKVEDKPEIV FVTAYDEYAI KAFELNAVDY LLKPFSRKRF EETINRVMSH SKKDRIKDTI KINKAISQLT PELKRIPVNS KRGRIKLLKP SEIYYATTEG GKVFITSEEG VFEFANGLKE LEEMLNLPQF FRCHRSYLVN LSKVKELIPW FKGNYYLIIN DESEEEIPVG RTRVNELKKK LNL
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