| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_10390 |
|---|
| Symbol | |
|---|
| ID | 7314627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 1127123 |
|---|
| End bp | 1127809 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643611478 |
|---|
| Product | cytidylate kinase |
|---|
| Protein accession | YP_002508790 |
|---|
| Protein GI | 220931882 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0283] Cytidylate kinase |
|---|
| TIGRFAM ID | [TIGR00017] cytidylate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000000000240582 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAATG TAATAGCAAT TGACGGACCA GCCGGGGCAG GAAAGAGTAC TTTAGCCCGT
TTATTGGCCC GGAAGCTTAA ATACAGGTAC TTAGATACCG GAGCAATGTA CCGGGCCGTT
ACCTGGTTAG CGCTAAGGGA AAACATTGAC CTTGACAATA TTCAGGGGTT GACCAGCCTT
GCCAATAACA TAGATATAGA GTTTTCTCCA CCTTCCGGGG ATAGAAAAGG ACGGATATAT
GTTAATGGTA ATGATGTTAC TGAGGAGATA AGAACACCAC TTATTAATAA AAATGTGTCA
AAGGTGGCCA GGGTTAAAGG TGTCAGGGAC GCCATGGTCA GGCAACAGAG GAAACTGGCT
CAAGGTGGCC ATATTATTAT TGATGGTCGT GATATAGGTA CCAGGGTAGT TCCTGATGCT
GAATTTAAAT TCTTTATTAC GGCTTCATTA GAGGAGCGGG CCAGAAGGCG TTATACTGAA
CTTAAAGAAA AGGGTACAGG GGTAAATTTT CAAGAGGTGA AAGCGGAAAT AGCAAGGCGG
GATAAAATTG ATTCAGAACG GGAGTGTTCT CCCCTGACCA AACCGGAGGA CGCGTTTTTA
ATTGATACTA CTGGTATGTC CATTGATGAG GTGTTAACCA GGGTTATTAA TATTATCAGA
ACAGGGGGCC AGGATTTAAA TGAATAA
|
|---|
| Protein sequence | MNNVIAIDGP AGAGKSTLAR LLARKLKYRY LDTGAMYRAV TWLALRENID LDNIQGLTSL
ANNIDIEFSP PSGDRKGRIY VNGNDVTEEI RTPLINKNVS KVARVKGVRD AMVRQQRKLA
QGGHIIIDGR DIGTRVVPDA EFKFFITASL EERARRRYTE LKEKGTGVNF QEVKAEIARR
DKIDSERECS PLTKPEDAFL IDTTGMSIDE VLTRVINIIR TGGQDLNE
|
|---|
| |