Gene Hore_10260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_10260 
Symbol 
ID7314614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp1115713 
End bp1116708 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content43% 
IMG OID643611465 
Product3-oxoacyl-(acyl-carrier-protein) synthase III 
Protein accessionYP_002508777 
Protein GI220931869 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.00789963 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAGGA GAGCAACGGT AACAGGAGTG GGTATGTATG TTCCTCCAAA GATTTTAACA 
AATAAAGATT TAGAGAAGAT GGTTGATACC AGTGATGAGT GGATAACTAC CAGGACCGGT 
ATTAAAGAAA GAAGAATTGC TGCTGATGAT GTGCCGACCT CAGAACTGGC TTTAAAGGCA 
GCCCGGAAAG CGCTGGCTGA TGCCGATTTG AAGGCAGAAG AGCTTGATTT AATTATGGTG 
GCAACAGTAA CCCCGGATAT GTCTTTTCCA TCAACTGCCT GTATTTTACA GGAAAAACTG 
GGGGCTGATA AGGCTGCTGC CTTTGATATG GAGGCCGGTT GCTCAGGGTT TGTCTATGCA 
ATGAGTGTAG CCAGTCAGTT TATAGAAACA GGTATGTACG ATAATATCTT AATTATAGGT 
GCTGAAACCC TTTCCAAGAT AACAGACTGG GAAGATAGAA GTACCTGTGT TCTGTTTGGA 
GATGGGGCCG GTGCTGCTGT ATTACAGCCA ACTGAAAATG GAGGTATACT GGCCACTGAA 
CTGGGGGCAG ATGGTACCGG TGGCAAGAGC CTGTTTATGC CAGCCGGTGG TTCCCTGAAT 
CCAGCTGATA AAACGACAGT TGAAGAGAAA ATGCATTATA TAAAAATGGA AGGAAATCAG 
GTCTTTAAAT TTGCTGTTAA AAAAATGGGG CAGGCTTCCC TGGATGTTAT TAAAAAGGCT 
GGTTTAAATC CCGATGATGT TGATTTATTT GTTCCCCACC AGGCAAATAT TAGAATTATA 
GATGCTGCCG CCAAAAGATT GAATTTAACC AAAGACAGGG TTTTTGTCAA TTTACCTAAG 
TATGGAAATA CTTCAGCTGC CTCTGTGCCC ATTGCCCTGG CTGAAGCTAA AGAAGAAGGT 
TTAATTAATA ATGGTGATAT AATTGTACTT GTTGCCTTTG GGGCTGGCCT GACCTGGGCA 
TCTGCAATAA TTAAATGGGA TGAGGGGGAG AACTAA
 
Protein sequence
MGRRATVTGV GMYVPPKILT NKDLEKMVDT SDEWITTRTG IKERRIAADD VPTSELALKA 
ARKALADADL KAEELDLIMV ATVTPDMSFP STACILQEKL GADKAAAFDM EAGCSGFVYA 
MSVASQFIET GMYDNILIIG AETLSKITDW EDRSTCVLFG DGAGAAVLQP TENGGILATE 
LGADGTGGKS LFMPAGGSLN PADKTTVEEK MHYIKMEGNQ VFKFAVKKMG QASLDVIKKA 
GLNPDDVDLF VPHQANIRII DAAAKRLNLT KDRVFVNLPK YGNTSAASVP IALAEAKEEG 
LINNGDIIVL VAFGAGLTWA SAIIKWDEGE N