| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_10220 |
|---|
| Symbol | |
|---|
| ID | 7314610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 1113253 |
|---|
| End bp | 1113726 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643611461 |
|---|
| Product | predicted metal-binding, possibly nucleic acid-binding protein |
|---|
| Protein accession | YP_002508773 |
|---|
| Protein GI | 220931865 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 1.30799e-16 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATTG ACCTGTCCCG GTTAGAAGAG ACTGGCAGCC ATGGAAAAAT ATCTCGCCAG
GTTGATTTTC CAGATATTTC TTTCAGGCAT GAGAAACTTG AAACTCCATC GCCTTTCAAG
CTGGAACTTG ATATTTATTC TACTAAAGAT TCCTTTGTGT TCAGTGGTAT ATTGGAAGGG
GAGATCTTGC TGACCTGTAG CCGGTGTCTG GAAAAGTTTT TACACGGGAT AAAGCTTAAA
ATTGATGAAG AATTAATGAA GAATGAAATC GATGATTTAA GCAGAGTTGA TCTTACATCT
AACCTGGTTG AAGATATACT GCTTTCTTTG CCTATTAAGC CTGTCTGTTC AGAAGACTGT
AAGGGTTTAT GTTCCGTATG TGGTCATAAC TTAAATGAAG GGGATTGTGG TTGTAACCGG
GAAAGCATAG ACCCTAGACT GGCTAAATTA AAAGAGTTTT ATGATAAACA ATAA
|
|---|
| Protein sequence | MEIDLSRLEE TGSHGKISRQ VDFPDISFRH EKLETPSPFK LELDIYSTKD SFVFSGILEG
EILLTCSRCL EKFLHGIKLK IDEELMKNEI DDLSRVDLTS NLVEDILLSL PIKPVCSEDC
KGLCSVCGHN LNEGDCGCNR ESIDPRLAKL KEFYDKQ
|
|---|
| |