| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_09670 |
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| Symbol | |
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| ID | 7313460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 1050628 |
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| End bp | 1052940 |
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| Gene Length | 2313 bp |
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| Protein Length | 770 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643611406 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_002508718 |
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| Protein GI | 220931810 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 62 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCACA GATTTAAAAA ACCTTTGTTT AAAATATCAG TAATAGTTAT TGTAACTTTT
GTACTTCTTG AAGCCCTGAT CTTTATTATC CCTTTTCCAG AAGAAAAATT AAAAAGGTCC
CAGTCAACCC TTGTCTATTC TAAGGAAGGT AAGGTTTTGC GGGCCTTTAT ATCGAAGGAT
GGAAAGTGGC GGATCTGGAC TCCTCTTGAG GATATATCTC CCCATTTGAT TAAATTTGTT
GTTAATTACG AAGACCGGTT TTTTTACTAT CACCCCGGGG TTAATCCCCT GGCAATAATG
AGAGCATTCT GGCAAAATAT AAGGACCAGG GAGATTGTTT CAGGTGGTTC TACTATTACC
ATGCAGGTTA GCCGCCTAAT GGAACCCAAA AAAAGGACTT TAAAAAATAA GATAATTGAG
GCCTTCAGGG CCCTCCAGCT GGAGCATTTT TATACAAAGA ATGAAATTCT TGAAATGTAT
CTTAATCTGG CCCCATATGG AGGTAATATA GAGGGAGTTG AAGCAGCCAG CTATTTATAT
TTTGGAAAAG CTCCCTCGCA ACTTAGTTAT GCTGAAGCAG CTTTAATAAC ATCATTACCA
CAATCACCGA CCATATTAAG GCCTGATTAT AACCCTGATG GGGCACGCAA AGCCAGAAAT
AAAGTTCTTA AAAGGATGTT GAGGTCTGGT GTAATTGATA AAGATAGTTA TTTAGAAGCT
ATGGAGGAAC CTGTTCCTGC TTCCAGAAGG GAATGGCCTT TTATTGCCCC TCATTTATGC
CGGGAGCTCC ATCTTGAGAA TAATGATAGG TCCAGAATTT ATGCAACAAT TGATAGTGAC
ATACAACTAA TGACAAAAAG GATGCTGGTT AACCATCTCC GGGCCTTTAA GAGCAAAGGC
ATAACCAATG GGTCTGTAGT AGTTATAGAT AATAAAACCC ATGAAATAAA GGCCATGGTT
GGTTCTGTCA GCTTTTTTGA TGAAGATAAT AATGGCCAGG TAAATGGGGC CCTGGCCCTG
CGTTCTCCGG GCTCTACTCT GAAGCCTTTT ATATATGGAC TGGGTATTTG TCAGGGAATA
ATAACACCTG GTCATTATTT AGAAGATGTA CCAATTGACT ATGGTGGCTA TTCACCTGAA
AATTATGATA GAACATATAA TGGTATAGTA TCAGCTGAAG AAGCATTGAA ACGTTCTTTA
AATGTTCCTG CTGTAAACCT TAATGCAAGA CTTAATGAAG GTACTGATCT TTACAGATTA
CTGAAAAAAG CCGGGATTAG TTCTATCAGG AATTTAGATA ATTATGGACT GGCTATCGCC
CTCGGTGGTT GTGAAATTAA TTTGCTTGAG CTTACGTCTT TATATTCTTC CATGGCCTGT
GGTGGTTACT ATTATGAGCC AATATTAACA GAAAACAAGA AGACAACATC GGTAAAATTA
TTTGATGAGG GAACCAGTTT TATAATAACA GAAATACTGA CAGAATTAAG GAGGCCTGAT
CTTCCTGCAG CCTGGCAGTT TACTGATTTG CCCCGGATAG CCTGGAAAAC AGGCACCTCA
TATGGGCACC GCGATGCCTG GAGTATAGGT TATAACCCCC GTTATACTGT CGGGGTCTGG
CTGGGGAATT TTGATGGCAG GGGATCTCCT AATCTTGTTG GAGCCAGGGC TGCGGCTCCA
TTATTATTTG ATATATTTAA TGTCTTGAAT AAAAATAATC CGACTGGATG GTTTGAAAGG
CCTGATACTG TTGGAATAAG GAAAGTCTGC AGTCTCAGTG GTCAGCTTCC CAATAAATAT
TGCCCTGCTA CTGTTGAGGA GTATTATTTA AAAGACCGTT CTCCAACTGT AAAGTGTCAG
TTTCACCGTA TTGTATATCT TAATGAAGAA GGTTACCGGG TTCCTAAAAG CATAAAAAAA
GATTTTAACC TGGAAAGAAA AATATATATT CACTGGCCCC CCAGGATCGC CAGCTGGAGG
ACCAGCCATG GTTACCCAGT CTACCAGCTA CCAGAATTAC AACCTGATTT TCAGCATCAG
CTTTCAGGTA AACCTCCGGT AATTGAATCA CCGGTTGAGG GTGTTATCTA TGATTTGCGG
CAGGGTGTAT CTGATAAATA TCAAAAAATT GCTTTCACAG CTTCTGTCTC CAATGATGTT
AGCCATATTT ACTGGTTTGT TGATGGTAGT TTGATTGGGA CAGTAAAACC TGGAGAAAAG
CTTTTTTATC TGCCTGAACC CGGTGAACAT GAGGTAGTTT GCCAGGATGA TATGGGGCGT
TTGAATAAAA TTAATATAAT TATTAAAAAA TAA
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| Protein sequence | MNHRFKKPLF KISVIVIVTF VLLEALIFII PFPEEKLKRS QSTLVYSKEG KVLRAFISKD
GKWRIWTPLE DISPHLIKFV VNYEDRFFYY HPGVNPLAIM RAFWQNIRTR EIVSGGSTIT
MQVSRLMEPK KRTLKNKIIE AFRALQLEHF YTKNEILEMY LNLAPYGGNI EGVEAASYLY
FGKAPSQLSY AEAALITSLP QSPTILRPDY NPDGARKARN KVLKRMLRSG VIDKDSYLEA
MEEPVPASRR EWPFIAPHLC RELHLENNDR SRIYATIDSD IQLMTKRMLV NHLRAFKSKG
ITNGSVVVID NKTHEIKAMV GSVSFFDEDN NGQVNGALAL RSPGSTLKPF IYGLGICQGI
ITPGHYLEDV PIDYGGYSPE NYDRTYNGIV SAEEALKRSL NVPAVNLNAR LNEGTDLYRL
LKKAGISSIR NLDNYGLAIA LGGCEINLLE LTSLYSSMAC GGYYYEPILT ENKKTTSVKL
FDEGTSFIIT EILTELRRPD LPAAWQFTDL PRIAWKTGTS YGHRDAWSIG YNPRYTVGVW
LGNFDGRGSP NLVGARAAAP LLFDIFNVLN KNNPTGWFER PDTVGIRKVC SLSGQLPNKY
CPATVEEYYL KDRSPTVKCQ FHRIVYLNEE GYRVPKSIKK DFNLERKIYI HWPPRIASWR
TSHGYPVYQL PELQPDFQHQ LSGKPPVIES PVEGVIYDLR QGVSDKYQKI AFTASVSNDV
SHIYWFVDGS LIGTVKPGEK LFYLPEPGEH EVVCQDDMGR LNKINIIIKK
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