| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_09280 |
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| Symbol | |
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| ID | 7313421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 1000866 |
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| End bp | 1002227 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643611367 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_002508679 |
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| Protein GI | 220931771 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00000476954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTTAA TCAATGAAAT AAACCGAAGA AAAGAAATGA TAAAAAATAT ACTTGTCCTG
GCCTTTCCGG CAGTAATGGA AATGAGCCTC AATACCATGC TGGGGTTTGC CGATACCTTG
ATGATTAGCC GGATAATTGG AAAAGAAGGT CTTGCTGCCG TAGGTTTTGC CAATCAAATT
ATTTTTACCC TGATATTTAT ATTTTCCTCT TTCAATGCTG GAGCCACAGC TATGGTGGCC
AGAAGCTATG GTGAGAAAAA TTATAAACGT TTGAATAAGA TTGTCGGTGA AAATTTAACC
CTAAACCTGT TTATTGGCAT TATTATTTTT ATGGCATCCT ACTTTTATGG AGATCAAATT
CTTAAAGTAT TTGATATCTC AAAAAACGTA TACCAGATGG GGCTTAGCTA TCTAAAAGTT
GTCTCATTCA GTCAGTTATT TATGTTTATT TCGTTTGCGG CCGCTGCCAG CCTCAGGGGA
GCGGGAGACA CCAAAACACC AATGTATATA ACCGGTATGG CTAACATTTT AAATATCTTT
GGGAACTATG CCCTGATGAC AGGTTTCTAT GTCTTCCCCG AGCTCGGTAT AGCCGGGGCT
GCCCTTTCTA CAACTATTTC CCGGGCTATT GCTGCCTTTT TGTACCTTTA TATTTTAATA
TCAGGCGAAA GAAAGATTAA ACTTCATTTC CATAGTCTCA GGATTTCTAC TTATATTATA
AAACCCCTCT GGAAGTTAAG TTATGCTGCC GCCCTGGAAC AATTTTTTAT GCAGCTGGCT
TTTTTTACTA ATGGTATAAT TATTTCAAAA CTGGATACAA CATCAGAAGC AGCTTTCAGA
ATACTAATAA ATATTGAATC AACCTCATTT ATGCCGGCCA TCGGAATAGC TATAGCCACT
ACAACCCTGG TGGGGAAACA CCTTGGAGAA AAAAATCCTG AAAAATCCCT GGATACCGGG
TATACTGCTG CCCTGCTGGG AATAGTCTGG GGTATTTTTA TGGGAACTAT TTTCTTCCTG
TTACCGGTAC CAATACTCAG TATTTTTACC AGTGAATCTC CTTTGATATC AAGGGCCATT
AATTCTCTTA AGATTGCCGG TTTTAATCAA CCCCTCCTGG CTTTTATGAT CATTATGGCC
GGGGCTCTGA GGGGAGCCGG TGATACCAGG GGAGCCATGA TCTTGACATC ATTAAGACTC
TGGACTATTT TTATTCCTTT ATCCTATGTC TTTGCCATCA TTTTACAATA TGGAGTAGCC
GGAGTCTGGA TAGCAGAAAT AAGTTCCTTT ATAATTTTCT CAATACTAAT AAATCGCCGC
TTTAAATCTA TGAAATGGGC TAAAATAAAA ATATTTGATT AA
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| Protein sequence | MLLINEINRR KEMIKNILVL AFPAVMEMSL NTMLGFADTL MISRIIGKEG LAAVGFANQI
IFTLIFIFSS FNAGATAMVA RSYGEKNYKR LNKIVGENLT LNLFIGIIIF MASYFYGDQI
LKVFDISKNV YQMGLSYLKV VSFSQLFMFI SFAAAASLRG AGDTKTPMYI TGMANILNIF
GNYALMTGFY VFPELGIAGA ALSTTISRAI AAFLYLYILI SGERKIKLHF HSLRISTYII
KPLWKLSYAA ALEQFFMQLA FFTNGIIISK LDTTSEAAFR ILINIESTSF MPAIGIAIAT
TTLVGKHLGE KNPEKSLDTG YTAALLGIVW GIFMGTIFFL LPVPILSIFT SESPLISRAI
NSLKIAGFNQ PLLAFMIIMA GALRGAGDTR GAMILTSLRL WTIFIPLSYV FAIILQYGVA
GVWIAEISSF IIFSILINRR FKSMKWAKIK IFD
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