Gene Hore_08890 details

Gene Information

• Locus tag: Hore_08890
• ID: 7314879
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothermothrix orenii H 168
• Kingdom: Bacteria
• Replicon accession: NC_011899
• Strand: +
• Start bp: 957256
• End bp: 957672
• Gene Length: 417 bp
• Protein Length: 138 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 643611322
• Product: nitrogen-fixing NifU domain protein
• Protein accession: YP_002508640
• Protein GI: 220931732
• COG category: [C] Energy production and conversion
• COG ID: [COG0822] NifU homolog involved in Fe-S cluster formation
• TIGRFAM ID: [TIGR03419] FeS cluster assembly scaffold protein NifU, Clostridium type

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000000000453527
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATTCTG AAAAAGTAAT GGAACACTTC AATAATCCCA GAAATGTCGG TGAGATAAAG 
GATGCAGATG CGGTAGGAGA AGTAGGTAAT CCTGTTTGTG GGGATATAAT AAAACTATAT 
TTAAAGATTA AAGATGATAC GATAGAAGAT ATTAAGTTTA AAACATTTGG TTGTGGTGCA 
GCTGTGGCGA CCAGTAGTAT GGTTACTGAA CTGGTAAAAG GAAAAAAAAT TGATGAGGCA 
TTAAAGGTCA GTAAAGAGAC AGTAGCTGAG GCCCTGGATG GTTTGCCATC CAACAAAATG 
CATTGCTCTA ACCTGGCTGC TGATGCTTTG CATAAAGCTA TTAAAAGTTA TAATAAGAAG 
GATAACAGTG ATAATTCAGG CAAGGAAAAT GATACTCTAG ATAAGGCAAC CAGTTAG 

 

Protein sequence

MYSEKVMEHF NNPRNVGEIK DADAVGEVGN PVCGDIIKLY LKIKDDTIED IKFKTFGCGA 
AVATSSMVTE LVKGKKIDEA LKVSKETVAE ALDGLPSNKM HCSNLAADAL HKAIKSYNKK 
DNSDNSGKEN DTLDKATS