Gene Hore_08700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_08700 
Symbol 
ID7314857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp937182 
End bp938858 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content37% 
IMG OID643611300 
Productbeta-lactamase domain protein 
Protein accessionYP_002508621 
Protein GI220931713 
COG category[R] General function prediction only 
COG ID[COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily 
TIGRFAM ID[TIGR00649] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value4.65654e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAAAA AACATAATAT AAATGAAGTA AAGATGATTC CTTTAGGTGG AGTCGGGGAA 
ATAGGTAAAA ACATGATGCT TGTCGAAATG GCTGGAGAGA TATTAATTAT TGATGCCGGG
GTCATGTTTC CTGAAGATGA TTTGCTGGGA ATTGACCTGG TAATCCCTGA TTTTTCTTAT
GTAAAGGAAA ATGCCAACAG GGTCAAAGGT ATTGTTTTAA CCCATGGTCA TGAGGATCAT
ATCGGGGCTT TACCATACCT GTTAAAAGAA ATTAATGTTC CTGTCTTTGG AACTAAATTG
ACCCTGGGGC TTGTTGAAGG TAAACTCAAG GAGCATAGAA TAAATAAAGG GCGTAAGTTA
AAAGTTGTTA ACCCAGGTAG TTCAATAAAT GTAGGTTCTT TTAAAGTAGA TTTCATACTT
GTTAACCATA GTATTGCAGA TACCTGTGCT CTGGCCATTC ACACACCTTT AGGACCGATT
ATTTATGCCA GTGATTTTAA GTTTGATCAG ACACCTATCG ATGGTGAAGT AGCAGACTTT
CATAAACTGG CCGAACTCGG TGATAATTAC CCCGGAGTAC TGGCTTTGTT TGCAGATAGT
ACCAATGTAG AACGGGAAGG GTATACTCTT TCAGAAAAAG TAGTTGGTGG TACTATTGAC
GATATTTTTA GAAAGGCACG TAATAGAATT GTAGTGGCTA CTTTTGCTTC CAATATTCAC
CGGGTTCAGC AAATAGTAGA TGCTGCCTTT AAATATAACC GTAAGATTGC TTTTACGGGA
CGGAGTATGA TTAATAATAT AGAAATTGCC AGGGAACTGG GTTATTTAAT AATTCCTGAA
GATATGATAG TAGATATTAG AAATATATCT AATCTCCCTG ATGATAAAAT TGTGCTTTTA
ACTACCGGTA GCCAGGGAGA GCCCATGGCA GCATTAACCA GAATGGCCAG GGGTGATCAT
TATCATATAA ATATTAAAGA TGGTGACACG GTTGTTATTT CTGCATCGGC AATACCCGGG
AACGAAAAAC TGGTTGGACA GACAATTAAC CAGTTATTTA AAAGAGGGGC CAATGTAATT
TATGAAGACA TTTCAGGAGT TCATGTATCC GGACATGCCA GTCAAGAAGA ATTAAAATTG
ATGTTAAATC TGGTAAAACC TGAATTCTTT GTTCCTGTTC ATGGTGAATT CAGGCATTTA
CACCGACATG CTAAATTAGC AGAAGAAGTT GGCATCCCTG AGAAGAATAT CTATATTGCT
GATATTGGTG ATGTAATTAG TTTCACCAAA CGAAGGGTAA AAAAGGTCGG CGAAATAAGG
GCCGGTCAGG TTCTGGTTGA CGGCCTTGGT GTTGGTGATG TTGGCAACAT TGTATTAAGG
GATAGAAAAC TTCTTTCAGA AGATGGTATT ATTATTGTAG TTGTGACCAT TGATAAGAAA
GGGAAAATAT TATCAGGTCC AGATATTATT ACCCGGGGAT TTGTATATAT CCGTGAATCA
GAAGAATTAA TTGCTGAAGC AACCTCACGT GTTGAAAAAG CACTGGCTGA GTGTGAAGCG
AATAATATTA CTGAGTGGTC TGTATTAAAA AGTACCATTA GGGATGCATT AAATGATTAT
ATTTATAAAA AAATTAAACG TAATCCCATG ATTCTCCCTA TTATTATGCA GGTATAA
 
Protein sequence
MPKKHNINEV KMIPLGGVGE IGKNMMLVEM AGEILIIDAG VMFPEDDLLG IDLVIPDFSY 
VKENANRVKG IVLTHGHEDH IGALPYLLKE INVPVFGTKL TLGLVEGKLK EHRINKGRKL
KVVNPGSSIN VGSFKVDFIL VNHSIADTCA LAIHTPLGPI IYASDFKFDQ TPIDGEVADF
HKLAELGDNY PGVLALFADS TNVEREGYTL SEKVVGGTID DIFRKARNRI VVATFASNIH
RVQQIVDAAF KYNRKIAFTG RSMINNIEIA RELGYLIIPE DMIVDIRNIS NLPDDKIVLL
TTGSQGEPMA ALTRMARGDH YHINIKDGDT VVISASAIPG NEKLVGQTIN QLFKRGANVI
YEDISGVHVS GHASQEELKL MLNLVKPEFF VPVHGEFRHL HRHAKLAEEV GIPEKNIYIA
DIGDVISFTK RRVKKVGEIR AGQVLVDGLG VGDVGNIVLR DRKLLSEDGI IIVVVTIDKK
GKILSGPDII TRGFVYIRES EELIAEATSR VEKALAECEA NNITEWSVLK STIRDALNDY
IYKKIKRNPM ILPIIMQV