Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_08130 |
Symbol | |
ID | 7314800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 873872 |
End bp | 874441 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643611244 |
Product | glycerol-3-phosphate responsive antiterminator |
Protein accession | YP_002508565 |
Protein GI | 220931657 |
COG category | [K] Transcription |
COG ID | [COG1954] Glycerol-3-phosphate responsive antiterminator (mRNA-binding) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACATT TGAAAAAGTA TTTCAAAAAA CACCCGGTCA TTGCCGGTAT CAGGGATACC AGTCAGCTCA ATTTTGCTTT ATCAAGTGAT GTTATAGCCC TTTTTATACT CTGTGGAGAT ATTTTTATTC TGCCAGAAAT TATGGAAAAG GCCAGGGAAC GGGATAAACT GGTTTTTCTC CACATAGATT TAATCAATGG AATAGGCCGG GATAAAAAAG GCATTAAATA TCTTGCTGTT AATAACCTCT GTGATGGAAT TGTAACCACC AAGAGTAATC TTATAAAGGC GGCCAAAAAA GAGGGTTTAA TGGCAATACA ACGTCTTTTT TTACTCGATT CAGCTGCCCT GAAGACTGGA GAACACCTGC TGGAAATGAA TAAACCGGAT GCTGTAGAAA TACTACCGGG GATTGCTGCC CCATATTTTA TTGAACACAT TAAGCATCAG CTTCCCTGTC CTATTATTGC GGGGGGGTTA ATAAGACGAA AAGAAGAAAT AGATAATCTT GTCGATAAAG GAGTCCTGGC AGTATCAACA AGTAATAAAA AACTATGGAA GGAATACTAA
|
Protein sequence | MKHLKKYFKK HPVIAGIRDT SQLNFALSSD VIALFILCGD IFILPEIMEK ARERDKLVFL HIDLINGIGR DKKGIKYLAV NNLCDGIVTT KSNLIKAAKK EGLMAIQRLF LLDSAALKTG EHLLEMNKPD AVEILPGIAA PYFIEHIKHQ LPCPIIAGGL IRRKEEIDNL VDKGVLAVST SNKKLWKEY
|
| |