Gene Hore_08130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_08130 
Symbol 
ID7314800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp873872 
End bp874441 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content38% 
IMG OID643611244 
Productglycerol-3-phosphate responsive antiterminator 
Protein accessionYP_002508565 
Protein GI220931657 
COG category[K] Transcription 
COG ID[COG1954] Glycerol-3-phosphate responsive antiterminator (mRNA-binding) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACATT TGAAAAAGTA TTTCAAAAAA CACCCGGTCA TTGCCGGTAT CAGGGATACC 
AGTCAGCTCA ATTTTGCTTT ATCAAGTGAT GTTATAGCCC TTTTTATACT CTGTGGAGAT
ATTTTTATTC TGCCAGAAAT TATGGAAAAG GCCAGGGAAC GGGATAAACT GGTTTTTCTC
CACATAGATT TAATCAATGG AATAGGCCGG GATAAAAAAG GCATTAAATA TCTTGCTGTT
AATAACCTCT GTGATGGAAT TGTAACCACC AAGAGTAATC TTATAAAGGC GGCCAAAAAA
GAGGGTTTAA TGGCAATACA ACGTCTTTTT TTACTCGATT CAGCTGCCCT GAAGACTGGA
GAACACCTGC TGGAAATGAA TAAACCGGAT GCTGTAGAAA TACTACCGGG GATTGCTGCC
CCATATTTTA TTGAACACAT TAAGCATCAG CTTCCCTGTC CTATTATTGC GGGGGGGTTA
ATAAGACGAA AAGAAGAAAT AGATAATCTT GTCGATAAAG GAGTCCTGGC AGTATCAACA
AGTAATAAAA AACTATGGAA GGAATACTAA
 
Protein sequence
MKHLKKYFKK HPVIAGIRDT SQLNFALSSD VIALFILCGD IFILPEIMEK ARERDKLVFL 
HIDLINGIGR DKKGIKYLAV NNLCDGIVTT KSNLIKAAKK EGLMAIQRLF LLDSAALKTG
EHLLEMNKPD AVEILPGIAA PYFIEHIKHQ LPCPIIAGGL IRRKEEIDNL VDKGVLAVST
SNKKLWKEY