| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_08060 |
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| Symbol | |
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| ID | 7314793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 866688 |
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| End bp | 867683 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643611237 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_002508558 |
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| Protein GI | 220931650 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00175] isocitrate dehydrogenase, NAD-dependent, mitochondrial type
[TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type
[TIGR02088] isopropylmalate/isohomocitrate dehydrogenases |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00000000201667 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAACAG TAACTTTGAT TCCTGGAGAT GGAATTGGAC CTGAAATAAC GGACGTTGTG
GTTGAAGTTT TTGAAGCACT GGGGGTTGAT GTAGACTGGG AAGTAGTTAA TGCCGGCAAG
TCGGTAATGG ATAAATACGG CACCCCACTT CCTGATGAAG TAATTGAATC CATTAAGAAA
AATAAAGTAG CCTTAAAAGG GCCTATTACT ACACCTGTCG GATCTGGTTT TCGTAGTGTT
AATGTAGCTA TAAGAAAAAA GCTCAATTTA TATGCTAATT TACGACCTGT TGAGAGTTTA
CCGGGGCTTA AAACCCGTTA TGATAAGGTT AATCTTGTTG TAGTTAGAGA AAATACTGAA
GGATTATATA GCGGGGTAGA ACATAAAATT AGTGATTTTG CTGCCGAAAG TATAAAAATT
ATTACCAGAA AGGCGAGTGA GAGGATTATA GAATTTGCCT TCAGTTATGC TAAAAAAAAT
GACCGTCAGC AGGTTACTGC GGTTCACAAG GCCAACATAA TGAAAATTTC TGATGGGTTA
TTTCTGGATA CGGCCCGTAA GGTGGCTGAA AAATACCCTG GTATTGAGTA CAATGAGCGA
ATTATAGATA ATATGTGTAT GCAACTGGTT CAAAATCCTG AAGATTATGA TGTTCTGGTA
ATGCCTAATT TTTACGGAGA TATAGTATCA GATCTGGGGG CAGGTCTGGT TGGAGGGCTT
GGTGTAACCC CGGGGGCAAA TATTGGAGAT GAAATTGCAG TTTTTGAAGC AGTACATGGT
AGTGCCCCTG ATATTGCCGG AAAGGGAGTA GCCAATCCTG TGGCTATTTT ACGCTCAAGT
ATTATGTTAT TAAATCATAT CGGTGAAAGT GAAAAAGCCA GTAAACTTGA CCAGGCTATT
AAGAAAACCC TGGTTAAAGG TAAGGGTCTA ACTCCGGACC TCGGTGGTCA GGGAACCACC
CGGAGCTTTA AAGACCAGAT AATTAATAAT ATCTAA
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| Protein sequence | MITVTLIPGD GIGPEITDVV VEVFEALGVD VDWEVVNAGK SVMDKYGTPL PDEVIESIKK
NKVALKGPIT TPVGSGFRSV NVAIRKKLNL YANLRPVESL PGLKTRYDKV NLVVVRENTE
GLYSGVEHKI SDFAAESIKI ITRKASERII EFAFSYAKKN DRQQVTAVHK ANIMKISDGL
FLDTARKVAE KYPGIEYNER IIDNMCMQLV QNPEDYDVLV MPNFYGDIVS DLGAGLVGGL
GVTPGANIGD EIAVFEAVHG SAPDIAGKGV ANPVAILRSS IMLLNHIGES EKASKLDQAI
KKTLVKGKGL TPDLGGQGTT RSFKDQIINN I
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