Gene Hore_07730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_07730 
Symbol 
ID7314760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp828711 
End bp829865 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content41% 
IMG OID643611204 
Product1-deoxy-D-xylulose 5-phosphate reductoisomerase 
Protein accessionYP_002508525 
Protein GI220931617 
COG category[I] Lipid transport and metabolism 
COG ID[COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 
TIGRFAM ID[TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA AATTAGTTGT CCTGGGTTCA ACTGGCTCAA TCGGAACCCA GACCCTTGAA 
GTTCTCTCCC ATCTTGAAGA CCAGTGGGAG ATTCTGGCTT TAAGTGCCAA TAAAAGTACT
GGTTTAATTG AAAAACAGGC TAGAAAGTTT AAACCCCGTT ATCTTGTTAT GATGAATGAA
AGGGCAGCCC TGGAGCTTAA ACATAGATTG AGTGATATGT CTTCTGAGGT TTTAAGTGGT
ATGGAAGGGT TAATAACCAT TTCTTCTCTT GAAGAGGCTG ACCTGGTTAT AAATGCCCTG
GTCGGTGCGG TTGGTTTAAA ACCGACTGTT GCTGCTCTGC AGTCAGGGAA TACCCTTGGT
CTTGCCAACA AGGAGAGTCT GGTTATCGGA GGCGAGATTA TAAAGAGTTA TTTAAACGAA
GAGGGGCGGG TTTTACCAGT TGATAGTGAA CATAATGCAA TATTTCAGTT GCTAAACGGA
CATAATGATA AAGAGGTTGA AAGATTAATC CTGACAGCCT CGGGGGGACC ATTTTTAGAA
TTGCCCCGGG AGAGGTTTAA AGATGTATCC GTAAAAGATG CCCTTAAACA CCCTAACTGG
GATATGGGTG GCAAGATAAC CATAGATTCA GCTACCCTGA TGAATAAGGG GTTAGAAGTT
ATAGAAGCCC ATTATCTTTT TCGACAACCA TATCATAACA TAAATGTAGT TGTTCATCCT
GAAAGTATTA TTCACTCTAT GGTAGAGTTT GTAGATAAAT CAGTTATAGC TGAAATGGGG
TCGGCTGATA TGAGGATGCC GATCCAGTAT GTATTGACCT ATCCCCGGAA GGTAAAAAGT
TTAGCTAAAA GACTAGATTT AACCGAACTT GGTTATCTTA CTTTTAAAAA ACCGGATACC
GTAAAGTTTC CGGCTCTAAA ACTTGCCTAT GAAGCCGGGC AACAGGGAGG GACTATGCCT
GTTGTCTTAA ATGCCGCTAA TGAAATAGCG GTTTCTGCCT TTATGAATGA AAAGATTACA
TTTGATAAAA TACCGGTGGT AATAGAGCGG GTTATGGAAA ACCATCAGAT AATTTCTTCT
CCGGACCTGG AAGATGTAAT AGAGGTTGAT AACTGGGCCC GGGCCAGGGC TAAGGAGGTA
ACTGGACAAT GTTAA
 
Protein sequence
MKKKLVVLGS TGSIGTQTLE VLSHLEDQWE ILALSANKST GLIEKQARKF KPRYLVMMNE 
RAALELKHRL SDMSSEVLSG MEGLITISSL EEADLVINAL VGAVGLKPTV AALQSGNTLG
LANKESLVIG GEIIKSYLNE EGRVLPVDSE HNAIFQLLNG HNDKEVERLI LTASGGPFLE
LPRERFKDVS VKDALKHPNW DMGGKITIDS ATLMNKGLEV IEAHYLFRQP YHNINVVVHP
ESIIHSMVEF VDKSVIAEMG SADMRMPIQY VLTYPRKVKS LAKRLDLTEL GYLTFKKPDT
VKFPALKLAY EAGQQGGTMP VVLNAANEIA VSAFMNEKIT FDKIPVVIER VMENHQIISS
PDLEDVIEVD NWARARAKEV TGQC