Gene Hore_07560 details

Gene Information

• Locus tag: Hore_07560
• ID: 7314743
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothermothrix orenii H 168
• Kingdom: Bacteria
• Replicon accession: NC_011899
• Strand: +
• Start bp: 814566
• End bp: 815111
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 643611187
• Product: ATP-dependent protease peptidase subunit
• Protein accession: YP_002508508
• Protein GI: 220931600
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 3.22808e-16
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGTTGG TTAGTGATAT TCACGCAACC ACTGTTGTTG CGGTGAAATA TAAGGGGAAG 
ACAGCCATGG CTGGTGATGG CCAGGTAACC ATGGGTAATA CCATTATGAA AGGTGGAGCC 
AGAAAGGTTA GAAGGTTATA TAAAGGAAAT ATTCTGGCTG GTTTTGCCGG AACATCTGCT 
GATGCTTTCA CCCTTTTTGA AAAATTCGAG GTAAAATTAG AAGAGTATCA TGGTAATCTG 
GAGAGGGCTG CGGTTGAATT AGCTAAAGAA TGGAGAACTG ATAAAGTTTT GAGGAAACTT 
GAGGCTTTAT TACTGGTTGC TAATGAAGAG AAAATTTTAC TGATTTCAGG TAATGGTGAT 
GTTATAGAGC CTGATGATGA TGTAACTGCT ATAGGCTCGG GTGGCCCCTA TGCTCTTGCT 
GCTGCCCGGG CTTTAGTAAA ACATAATTCA GGTCTTGAAG CCCAGGATAT AGCCAGAGAG 
GCCTTGAAAA TAGCCTCAGA AATTTGTATT TATACAAATG GTAATATTGT TGTTGAAGAA 
TTGTGA 

 

Protein sequence

MRLVSDIHAT TVVAVKYKGK TAMAGDGQVT MGNTIMKGGA RKVRRLYKGN ILAGFAGTSA 
DAFTLFEKFE VKLEEYHGNL ERAAVELAKE WRTDKVLRKL EALLLVANEE KILLISGNGD 
VIEPDDDVTA IGSGGPYALA AARALVKHNS GLEAQDIARE ALKIASEICI YTNGNIVVEE 
L