| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_07540 |
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| Symbol | |
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| ID | 7314741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 811024 |
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| End bp | 813099 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643611185 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_002508506 |
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| Protein GI | 220931598 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial
[TIGR01057] DNA topoisomerase I, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00641456 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGAATA AAAGTAATAA TACACTGGTA ATTGTTGAAT CTCCTGCTAA AGCTAAAACA
ATATCAAAGT TTCTGGGAAA AGGATATAAA GTGGAAGCAA CAATGGGCCA TGTTATTGAT
CTACCCAAGA GCAAACTGGG AATAAATATA GATAAAGGTT TTGAACCCAG GTATATAACA
ATCAGGGGTA AAGGAAAAGT ATTAAAAAAA TTAAGAAAGG AAGTAAAAAA GAGTAAAGAT
GTTCTCCTGG CAACTGACCC TGATAGAGAA GGGGAAGCCA TATCATGGCA TCTGACCCGG
GCTTTGAAAA TAGATGAAGA TAAACCAAGG ATTGAATTTA ATGAAATAAC TAAAAGTGCT
ATTAAAAATG CCCTTAAAAA CCGCAGGCCT ATAGATAAGA ATCTGGTTAA TTCCCAGCAG
GCCAGACGCC TGCTTGACCG TCTTGTCGGT TACAAACTCA GTCCACTATT ATGGAAAAAG
GTGAGACGGG GTTTAAGTGC CGGGCGTGTT CAGACAGTTG CTGTCAAATT GTTATGTAAT
CGGGAAAAAG AGATAGAGTC TTTCGAACCT GAAGAATACT GGACTATTTC TGCTTCATTT
AATAAAAAAG ATAAAGATTT TATAGCTGAT CTGTACCGAA TTTCAGGTAA AAAATTCAAA
ATTAATAATG AGAAAGAAGC AAAACAAATT TTAGAAGATT TAAATAAAAG TAAATTTGTT
GTAAGTGACA TAAAAGAAAA AACAAGGAAA CGTAACCCCA ATCCACCCTT TACAACAAGT
ACCCTTCAAC AGAGGGCTTC TTCGATTCTG GGCTTTTCTG CTAAAAAAAC AATGTATCTG
GCCCAGCAGT TATATGAAGG AATAGATATG GGTAGCGAAG GGACCACTGG TCTTATAAGT
TATATACGTA CTGACAGTAC AAGAATCTCC AGAGAAGCCC AGAAACAGGC TTTAGACTAC
ATTAAAGAAG CTTTTGGGGA CAAATATATT CCCGATAAAG TGAAGGTATA TAAGGCAAAA
GAAGGTTCCC AGGATGCTCA TGAGGCTATT CGTCCTACTT CAGTTGACCG TACTCCAGGT
AAGGTAAAAA AATATTTAAA CAAAGACCAG TACAGGTTAT ATAAGTTGAT CTGGGAAAGG
TTTGTTGCCA GTCAAATGAG TCCAGCTCAG TATAAACAGG TGAAAGTATT GATAAAAGCA
GGAGATAAAT ATATTTTCAG GGCAAAGGGA TCCAGAATTA TATTCCCGGG GTTTTTACGG
GTTAACACAA GCAGTCAGAA AAAAGACATC ATATTACCAC CTGTTAAAAA GTCTGAAAGA
CTTGATGTTA AGGAAATCAA GCCAGAACAG CACTTTACCC AGCCACCACC ACGTTATACG
GAAGCTACCC TGGTTAAAAC ATTAGAAGAA GAGGGAATAG GCCGCCCCAG TACTTATGCT
CCGATTATTT CAACAATAAT CTCCCGGGGC TATGTGGAGC GTCAGGGTAA GCAGTTAAAA
CCGACTGAAC TGGGTTTTAT AGTTACAGAT CTGTTATCAA AATATTTTCC TGATGTAACT
GACATAGAAT TTACCGCACA TATGGAAGAA AGGCTTGATA AGATAGAAGA TGGCAAAGAT
GAATGGCGTA ATGTGCTTGA AGATTTTTAT TCCAATTTTT CCAGGAGACT TAAAGAGGCC
AGTGAGGAAA TGGAAGAAGT TAAACTTGAA GATGAGGTAA CTGATGAAGT ATGTGAAAAG
TGTGGCAGGA ATATGGTAAT AAAATATGGT CGTTATGGCA AATTTCTGGC CTGTTCTGGT
TATCCTGAAT GTAAAAATAC CAAGCCTTAT GTTATTAAAA CTGGAGTTAA ATGTCCTCAG
TGTAAAGAGG GAGAGCTTGT TCAAAGAAAA AGCCGTAAAG GGCGTACTTT TTACGGATGT
AGTTCTTACC CTGATTGCAA ATTTGTTGTC TGGAATAAAC CAGTTAAAGA AAAATGCCCT
GAATGTGGTG GCCTTATGGT AGAGAAGAAC TCAAAAAAGC AAGGCCGGTA TTATCTCTGT
ATTAACAAAG AGTGTGGTTA TAAGAAAGAA GTATAA
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| Protein sequence | MGNKSNNTLV IVESPAKAKT ISKFLGKGYK VEATMGHVID LPKSKLGINI DKGFEPRYIT
IRGKGKVLKK LRKEVKKSKD VLLATDPDRE GEAISWHLTR ALKIDEDKPR IEFNEITKSA
IKNALKNRRP IDKNLVNSQQ ARRLLDRLVG YKLSPLLWKK VRRGLSAGRV QTVAVKLLCN
REKEIESFEP EEYWTISASF NKKDKDFIAD LYRISGKKFK INNEKEAKQI LEDLNKSKFV
VSDIKEKTRK RNPNPPFTTS TLQQRASSIL GFSAKKTMYL AQQLYEGIDM GSEGTTGLIS
YIRTDSTRIS REAQKQALDY IKEAFGDKYI PDKVKVYKAK EGSQDAHEAI RPTSVDRTPG
KVKKYLNKDQ YRLYKLIWER FVASQMSPAQ YKQVKVLIKA GDKYIFRAKG SRIIFPGFLR
VNTSSQKKDI ILPPVKKSER LDVKEIKPEQ HFTQPPPRYT EATLVKTLEE EGIGRPSTYA
PIISTIISRG YVERQGKQLK PTELGFIVTD LLSKYFPDVT DIEFTAHMEE RLDKIEDGKD
EWRNVLEDFY SNFSRRLKEA SEEMEEVKLE DEVTDEVCEK CGRNMVIKYG RYGKFLACSG
YPECKNTKPY VIKTGVKCPQ CKEGELVQRK SRKGRTFYGC SSYPDCKFVV WNKPVKEKCP
ECGGLMVEKN SKKQGRYYLC INKECGYKKE V
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