| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_07220 |
|---|
| Symbol | |
|---|
| ID | 7312957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 780503 |
|---|
| End bp | 781636 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643611153 |
|---|
| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
|---|
| Protein accession | YP_002508474 |
|---|
| Protein GI | 220931566 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.000000309902 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAAAA AAACAGGAGT TTTGTTATTA CTACTGGTTT TATTGTCTGT TAATATTTAT
AACACCAATT ATGTAAAGGC CAGTTCATTA CCCAGGGTTG ATGCTGCCGC TGCTGCCGTA
GTTGATGTGG ACACAGGTCA GGTTTTATAC AATCACCGAA TGAATCATAA ATTGCCACCT
GCCAGTACAA CTAAAATCCT GACAACAATA ATTGCTATTG AAGAGGGAGA ACTAAATGAA
ATGGTAACCG TAAGTCGACG GGCAGCCTAT CAGGAAGGTT CTTCGATATG GTTACAGGAA
GGTGAGAAAT TACCCTTAGA AGATCTATTG TACGGGGTTA TGCTGGCTTC AGGTAATGAT
GCTGCAGTTG CCGTTGCTGA ACATATATCA GGTTCTGTAA AAAAATTTTC TGAACTGATG
AATAAACGGG CTAAAGAAAT AGGGGCCACC AATAGCAATT TTTTAAATCC CAGTGGTCTA
CCTCAGTCCG GGCATTATTC AACTGCCCAT GACCTGGCCA TGATTATGAG GTATGCGTTA
AAGAATGATA TTTTTGCCCG GATTACGTCA ACAAAATATA AAACTATCTC CTGGCCAGGT
AAAGAATGGG ACCGGGGCCT TAGAAATCAT AATAAACTTC TCTGGAAATA CCCTGATATT
ACTGGAGGTA AAACCGGTTA TACCAGGGCT GCCGGTCGTT GTCTGGTAGC TTCTGCAAAG
CGGGATAACC GACATGTTGT AGCTGTTGTC TTAAACTGTC CCAATGACTG GGTGGAAATT
AGAAAACTGC TTGACTATGG CCTTAATAAT TTTAAAAAAA TAAGATATAT AAAAAAAGGG
CAGGTTTTAC GGACCCTGGA GTGGACCAGG TCACGGGAGA AAACTTTCAA GCTGGTTACC
GGGGAAGATC TGGATATTGT TGTGCCTGAA GGGGGAAGTA TAAAAATTAA AAAAGAAATA
GTTCTTAACC CTGATATTAC TCTGCCCATT AATAAGGGTG ATGTAGTTGG TGAACTCATT
CTATACAGTG GGCAACGGAT TATTGGAAAA GCAGATGTGA TTTCTGGTAA TGACCTGAAT
TTTAACTCTA TTTTTTTGAG ATTCTGGCAT AAAATTAGTT CCCGGGATAA TTGA
|
|---|
| Protein sequence | MLKKTGVLLL LLVLLSVNIY NTNYVKASSL PRVDAAAAAV VDVDTGQVLY NHRMNHKLPP
ASTTKILTTI IAIEEGELNE MVTVSRRAAY QEGSSIWLQE GEKLPLEDLL YGVMLASGND
AAVAVAEHIS GSVKKFSELM NKRAKEIGAT NSNFLNPSGL PQSGHYSTAH DLAMIMRYAL
KNDIFARITS TKYKTISWPG KEWDRGLRNH NKLLWKYPDI TGGKTGYTRA AGRCLVASAK
RDNRHVVAVV LNCPNDWVEI RKLLDYGLNN FKKIRYIKKG QVLRTLEWTR SREKTFKLVT
GEDLDIVVPE GGSIKIKKEI VLNPDITLPI NKGDVVGELI LYSGQRIIGK ADVISGNDLN
FNSIFLRFWH KISSRDN
|
|---|
| |