Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_07140 |
Symbol | |
ID | 7312949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 772043 |
End bp | 773389 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643611145 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_002508466 |
Protein GI | 220931558 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.993125 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGGTTGT ATGGAACCAT GGAAATTAGT AATTCAGGGG TACTTCATAT CGGAGGTATT AGTACAGTAG ACCTTGTTGA AAAATATGGG ACTCCCCTCC TTGTTTTTGA TGAGTGGGAG ATCCGTAAAA AGGCCCGTGA ATATGTAAAA GCCTTTAATA AATATTACCC CAACTCCAGG ACAGTCTATG CCAGTAAGGC TTTTTTAAAC CAGGCTTTAT GTTATATTAT TGAAGAAGAA GGACTGGGGT TAGATGTAGT TTCAGGGGGT GAGTTATATA TTGCCCTCAA AGCAGGATTT CCACCTGAAA AAATCTTTTT CCATGGTAAT AATAAGTCAA ATGCTGAAAT TAAAATGGCA GTTGAGGCCG GTATAGGACG TTTTATGCTG GATAATTTAA AAGAAGCCAG ATATATTAAT AAAGTGGCCG GTAGACTGGA GAAAAGTATC AAGGCCATTT TACGGGTTAC CCCGGGAATT GAGGCCCATA CCCATGAATT TATCCAGACC GGTCAGATAG ATTCAAAGTT TGGAGTAAGT GTTTACCGGG ATCAGGCTTT AAAAGCAATT GAAGAGATAA TAAGAATGGA TAATATAGAA CTGACGGGAG TTCATGTTCA CATTGGTTCA CAGATTTTTA ATTTAACTTC CTTTAGCAGG ACTATAGATG TTATGTTTGA ATTTATGAAT AATGTCAGGG ATAAAACCGG GTATATCTTA AAAGAACTGG ATCTGGGAGG AGGTCTGGGT ATACCATATA CTGAGGATGA ACCTGATCCC GGTATTGATG AATATGCCAG ACTGGTTTCA GAGAAAGTCA GAGAAAAAAG TCATGAATTT GATTATCCAC TCCCGGTAAT TATTAACGAA CCCGGCAGAT CTATAATCGG TACAGCCGGA ACTACTTTAT ATACGGTAGG GACGGTAAAG GAGATACCCT TTATCCGGAA ATACCTCGCT GTAGATGGAG GTATGACCGA TAATATTAGA CCAGCCCTTT ATGGGGCAGA ATATGATGCT ATTTTAGCCA ACCGGGCCGA TGATGAACGG GAAGAGATTG TTTCCATTGC CGGTAAATGC TGTGAATCAG GTGATATTCT TATTCATGAT ATTAAAATGC CGGAAGCCAG GGAAGGAGAC ATTATAGCAA TTCCCTGTAC AGGGGCCTAC ACTTATGCCA TGTCAAGTAA CTATAATGGA TTAAGGAGAC CGGCAGTGGT TCTTGTCAAT GATGGGAATG CAGACCTGAT AATTAAGCGA GAATCCTATG AGGATCTGAT AAAAAATGAT ATAGTCCCGG CTCGATTGCG AAAAATAAAA CTAAAAAAAG TTGTTTCCCA TGGCTAG
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Protein sequence | MRLYGTMEIS NSGVLHIGGI STVDLVEKYG TPLLVFDEWE IRKKAREYVK AFNKYYPNSR TVYASKAFLN QALCYIIEEE GLGLDVVSGG ELYIALKAGF PPEKIFFHGN NKSNAEIKMA VEAGIGRFML DNLKEARYIN KVAGRLEKSI KAILRVTPGI EAHTHEFIQT GQIDSKFGVS VYRDQALKAI EEIIRMDNIE LTGVHVHIGS QIFNLTSFSR TIDVMFEFMN NVRDKTGYIL KELDLGGGLG IPYTEDEPDP GIDEYARLVS EKVREKSHEF DYPLPVIINE PGRSIIGTAG TTLYTVGTVK EIPFIRKYLA VDGGMTDNIR PALYGAEYDA ILANRADDER EEIVSIAGKC CESGDILIHD IKMPEAREGD IIAIPCTGAY TYAMSSNYNG LRRPAVVLVN DGNADLIIKR ESYEDLIKND IVPARLRKIK LKKVVSHG
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