Gene Hore_06780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_06780 
Symbol 
ID7312913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp735505 
End bp736566 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content42% 
IMG OID643611109 
Product3-methyl-2-oxobutanoate dehydrogenase (ferredoxin), alpha subunit 
Protein accessionYP_002508430 
Protein GI220931522 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAACA AGGTTTTAAT GAAAGGTAAT GAAGCGATCG GGGAGGCTGC CATTAAAGCT 
GGGTGTCGAT ATTTTTTCGG TTATCCTATA ACACCACAGA ATGCCCTTCC GGAATATATG
TCAAGAAGAT TGCCAGAAGT AGGTGGTGTG TTTTTACAGG CAGAAAGTGA AGTAGCTGCA
AGTAACATGG TATATGGTGC GGCCGGAGCT GGAGCAAGGG TTTTAACTTC TTCATCCAGT
CCTGGAATCA GCCTTAAAAT GGAAGGTATA TCTTATATAG CCGGGGCAGA ATTACCTGCT
GTAATTGTTA ACATCATGAG GGGTGGTCCT GGCCTGGGCG GTATTCAACC TTCCCAGTCG
GATTACTTCC AGGCTACAAA AGGTGGCGGG CATGGTGATT ACCGTCTGGC CGTTCTGGCT
CCATCATCTG TACAGGAGGC TGTTGACCTC ACTATGGAAG CCTTTGAAAT AGCAGACCGG
TACCGTAACC CGGTTATGGT AGTAGGAGAC GGAATTATCG GTCAGATGAT GGAACCAGTT
GAATTTAAAA AAGAAATAGA TCCATCCGAT TTACCGAAAA AAGAATGGGC TACTGACGGG
GCAAAAAATA GAGAAAGAAA TATAATTAAT TCCCTATCAC TTGACCCCAA AGATCTGGAA
GACCACAATC TTAAATTAAA AGATAAATAT GATAAAATGA AAGAAAATGA AGTAAGATAC
GAAACCTATA AAATTGAAGA TGCAGATATA GTTATTGTCG CCTATGGGAC GACAGCCAGA
ATTTCTTTAA GTACCATTGA AATGGCCCGG AAAGAGGGGT TAAAAGTTGG GCTTATCAGA
CCTATTTCCT TATTCCCCTT CCCCGGGAAA ATAATAAATG AAGTTGCTGA TAATGCCAGT
AAATTTCTGA CCGTTGAAAT GAGTACCGGC CAGATGGTTG AGGATGTTAA ACTTGCTGTC
AATGGTAAAA AACCGGTTTA TTTTTACGGA AGAACTGGTG GCATGGTTCC TTCACCCGAG
GAAATTATGG AGCAGGTTGT TAAAATTGGG GGTGAAAATT GA
 
Protein sequence
MGNKVLMKGN EAIGEAAIKA GCRYFFGYPI TPQNALPEYM SRRLPEVGGV FLQAESEVAA 
SNMVYGAAGA GARVLTSSSS PGISLKMEGI SYIAGAELPA VIVNIMRGGP GLGGIQPSQS
DYFQATKGGG HGDYRLAVLA PSSVQEAVDL TMEAFEIADR YRNPVMVVGD GIIGQMMEPV
EFKKEIDPSD LPKKEWATDG AKNRERNIIN SLSLDPKDLE DHNLKLKDKY DKMKENEVRY
ETYKIEDADI VIVAYGTTAR ISLSTIEMAR KEGLKVGLIR PISLFPFPGK IINEVADNAS
KFLTVEMSTG QMVEDVKLAV NGKKPVYFYG RTGGMVPSPE EIMEQVVKIG GEN