Gene Hore_06510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_06510 
Symbol 
ID7314557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp705380 
End bp706270 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content42% 
IMG OID643611082 
Productfarnesyl-diphosphate synthase 
Protein accessionYP_002508403 
Protein GI220931495 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000000111006 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACCAGG TGAATATAAA AGAAATTTTG ACTCAATACA CCAGTGAAGT CAACAGTGTT 
TTGAAGGAAA TAATGAATAT TGAGAAAAAT GCCCTGGCTC CCGGGCTGGT TAAGGCTATG
AAATATAGCC TGTTTTCTGG GGGAAAAAGG CTACGCCCGA TTTTAACCCT GATGGTGGCT
GAGATGTTAG ATGGAGATCG TGATAGTGCT TTGCGGGTCG GGGCTTCAAT AGAGCTGGTT
CATACTTATT CCCTTATTCA TGATGATTTA CCCAGTATGG ATGATGATGA TTTTCGACGG
GGGAAACCAT CAAACCATAA AGTGTTTGGC ACGGCAACAG CAATACTGGC CGGGGATGCC
CTCTTAACAT TTGCTTTTAA TATATTATCT AAACTTAATT TGCCTCCGGA TAAAGTGTTG
AAAATTATTG AAGTTATCAG TCAAGGGGCT GGTCATAACG GCATGGTTGG GGGACAGGTA
CTTGACCTGG AAGCAGAAGA TAAAGAAATT TCCCTTGAAG AGCTAAAGAA AATTCATTCC
GGTAAAACGG GAGCTCTTTT TAAAAGCTCT ATTTTAGCGG GAGCTTATTG TGCTAATCCT
GACCGGACAG AACTTACTGC ATTAGAGAGA TATGCCAGAT ACCTGGGGTT GACATTTCAA
ATAGTTGATG ATATTCTTGA CGTTACCGGT AATGAGGAAG TACTGGGAAA ACGGGTTGGC
CGTGATGATG AACTTAATAA AGCTACCTAT CCCCGTTTAC TGGGATTGAA ACAGGCTGTT
AAAGAAGCTG AATTCAATGC TGAGAAGGCC CGTGATTCCC TTGGGCCTTT TGGTGAAAGA
GCCTTTTTAT TAAAGCAGCT AGTTGATTAT ATACTGGTAA GACAATCATG A
 
Protein sequence
MNQVNIKEIL TQYTSEVNSV LKEIMNIEKN ALAPGLVKAM KYSLFSGGKR LRPILTLMVA 
EMLDGDRDSA LRVGASIELV HTYSLIHDDL PSMDDDDFRR GKPSNHKVFG TATAILAGDA
LLTFAFNILS KLNLPPDKVL KIIEVISQGA GHNGMVGGQV LDLEAEDKEI SLEELKKIHS
GKTGALFKSS ILAGAYCANP DRTELTALER YARYLGLTFQ IVDDILDVTG NEEVLGKRVG
RDDELNKATY PRLLGLKQAV KEAEFNAEKA RDSLGPFGER AFLLKQLVDY ILVRQS