Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_06510 |
Symbol | |
ID | 7314557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 705380 |
End bp | 706270 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643611082 |
Product | farnesyl-diphosphate synthase |
Protein accession | YP_002508403 |
Protein GI | 220931495 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000000000111006 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAACCAGG TGAATATAAA AGAAATTTTG ACTCAATACA CCAGTGAAGT CAACAGTGTT TTGAAGGAAA TAATGAATAT TGAGAAAAAT GCCCTGGCTC CCGGGCTGGT TAAGGCTATG AAATATAGCC TGTTTTCTGG GGGAAAAAGG CTACGCCCGA TTTTAACCCT GATGGTGGCT GAGATGTTAG ATGGAGATCG TGATAGTGCT TTGCGGGTCG GGGCTTCAAT AGAGCTGGTT CATACTTATT CCCTTATTCA TGATGATTTA CCCAGTATGG ATGATGATGA TTTTCGACGG GGGAAACCAT CAAACCATAA AGTGTTTGGC ACGGCAACAG CAATACTGGC CGGGGATGCC CTCTTAACAT TTGCTTTTAA TATATTATCT AAACTTAATT TGCCTCCGGA TAAAGTGTTG AAAATTATTG AAGTTATCAG TCAAGGGGCT GGTCATAACG GCATGGTTGG GGGACAGGTA CTTGACCTGG AAGCAGAAGA TAAAGAAATT TCCCTTGAAG AGCTAAAGAA AATTCATTCC GGTAAAACGG GAGCTCTTTT TAAAAGCTCT ATTTTAGCGG GAGCTTATTG TGCTAATCCT GACCGGACAG AACTTACTGC ATTAGAGAGA TATGCCAGAT ACCTGGGGTT GACATTTCAA ATAGTTGATG ATATTCTTGA CGTTACCGGT AATGAGGAAG TACTGGGAAA ACGGGTTGGC CGTGATGATG AACTTAATAA AGCTACCTAT CCCCGTTTAC TGGGATTGAA ACAGGCTGTT AAAGAAGCTG AATTCAATGC TGAGAAGGCC CGTGATTCCC TTGGGCCTTT TGGTGAAAGA GCCTTTTTAT TAAAGCAGCT AGTTGATTAT ATACTGGTAA GACAATCATG A
|
Protein sequence | MNQVNIKEIL TQYTSEVNSV LKEIMNIEKN ALAPGLVKAM KYSLFSGGKR LRPILTLMVA EMLDGDRDSA LRVGASIELV HTYSLIHDDL PSMDDDDFRR GKPSNHKVFG TATAILAGDA LLTFAFNILS KLNLPPDKVL KIIEVISQGA GHNGMVGGQV LDLEAEDKEI SLEELKKIHS GKTGALFKSS ILAGAYCANP DRTELTALER YARYLGLTFQ IVDDILDVTG NEEVLGKRVG RDDELNKATY PRLLGLKQAV KEAEFNAEKA RDSLGPFGER AFLLKQLVDY ILVRQS
|
| |