Gene Hore_06280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_06280 
Symbol 
ID7314533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp678547 
End bp679083 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content39% 
IMG OID643611058 
Producthypothetical protein 
Protein accessionYP_002508380 
Protein GI220931472 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00000000000000337732 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACCTAT TTTACAGGTT TGTAGTTTTT GTAATCACTG TTATATTTAT GTTCTGTAGC 
CTGCTTATGG GCCTGTATAG TTTTGGACTG GGTCAGGAAA AATTATTATC AGGGGTAGTA 
TTATCCCTGT ATAATAACTG GCAGGCAGGC ATTTTGTTCA TTATTGCCTT TCTGGCCGGT 
GCCTGGGTTA TTTATCCTAT ATTTAATCTG GGTCGTGAGC GGGAAACTAC CCTGATCAGT 
GCTGGGGAAC TGGGTAATGT AAATATTACA TTAGATGCCC TGGACAAACT TGTGAGAAAA 
GTAGCTGCCC AGCAGGAAGG TGTGACCAGG GTTTCAACGA AACTTAAAAC CCTTGAAAAT 
GAATTACATA TTTTCCTGAA CGTGAAGGTT AAACCTGACA GACCATTACC TCAGTTAACA 
AAAGACCTTC AAAATATCGT TAAATCTTAT ATTGAAGATA CAACAGGTGT CAATATTAAT 
GAAGTTAAGG TCTTGGTTGA TAGCATTGGT GACGAAACTA AGACCGAAGA AGATTGA
 
Protein sequence
MNLFYRFVVF VITVIFMFCS LLMGLYSFGL GQEKLLSGVV LSLYNNWQAG ILFIIAFLAG 
AWVIYPIFNL GRERETTLIS AGELGNVNIT LDALDKLVRK VAAQQEGVTR VSTKLKTLEN 
ELHIFLNVKV KPDRPLPQLT KDLQNIVKSY IEDTTGVNIN EVKVLVDSIG DETKTEED