Gene Hore_06110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_06110 
Symbol 
ID7314516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp666011 
End bp666526 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content40% 
IMG OID643611041 
ProductShikimate kinase 
Protein accessionYP_002508363 
Protein GI220931455 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATAT CTCTGGTTGG ATTTATGGGG ACAGGAAAGT CCAGTGTTGG AAAGTTGCTG 
GCAGAAAAAT TAAATTATCC ATTTCTGGAT ACCGATGACT TAATTGTAAA TAAAGCCGGA
ATGGGGATTC CACAAATTTT TTCTAAATAT GGTGAAGGGT ATTTCCGGAA ACTGGAAGAG
GAAGTTTTAC GCCATGTGGT GACCACCGGT GACAATTTTG TCCTGGCTAC CGGTGGGGGT
ATAGTTATTT CACCATATAA TAGAAAATTA CTTAAAGACT ATACGACACC GGTTTTATTA
TCAGCTTCAC CGGAAGTAAT TTATGAGCGG ATCAGTGGGG ATAAACGTCC TCTGCTTTTT
ACTGATGATC CCCTTGAGAA AATCAAGGAG CTCCTTGCAG AAAGGGAACA ATATTATAGT
CAGTTTGATA ATCAGGTTTA TACGGGAGGC AAGGAGAAGA GAGAAGTTGT AGATGAAATT
ATTCACCTGA TAGGAGTTGA TAGGCTTGGA CTTTAA
 
Protein sequence
MKISLVGFMG TGKSSVGKLL AEKLNYPFLD TDDLIVNKAG MGIPQIFSKY GEGYFRKLEE 
EVLRHVVTTG DNFVLATGGG IVISPYNRKL LKDYTTPVLL SASPEVIYER ISGDKRPLLF
TDDPLEKIKE LLAEREQYYS QFDNQVYTGG KEKREVVDEI IHLIGVDRLG L