Gene Hore_05950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_05950 
Symbol 
ID7314500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp647078 
End bp647959 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content43% 
IMG OID643611025 
Productpermease of the drug/metabolite transporter (DMT) superfamily 
Protein accessionYP_002508347 
Protein GI220931439 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTACAGA AAGCTAAAAC AAAAACCAGA GTTATTAAAG CAGATTTATT ATTACTGTTG 
GTAGTAACTG TCTGGGGGAC AACCTTTCCG GTTATGAAGA TGATACTGGT CGATACAGAC
CCTTTTTACT TTATAGCCCT TAGATTTATG GTTGCCTTTC TGGCCCTTTA TTTAGTTTTT
CATAAAAAAG TGACCAGGGA TGATTTTTCA GGGGAAACGG TTAGAAAAGG TGTAATCCTG
GGATTATGCC TTCTGGCAGG TTATGCCTTT CAGATAGTTG GTTTGCAGTA TACGACTGCT
TCCCGGTCTG CTTTTATTAC CGGGTTGTCG GTGGTTATGG TTCCTTTACT ATCGATAATG
ATTATAAAGC AGATCCCCGG TCCTTATACC TGGACAGGGG TGGCTCTGGC CACCATTGGA
TTATATTTAT TGACAGGGGC GGGTAAAATA GCAGTCAACC TGGGTGACTA CCTTACCTTT
TTCTGTGCTG TCTCCTTTGC CCTCCAGATT GTTTTATTAA GCAAGTATTT GCCCGGGAAT
AAACCGGTCG TTTTAACTTT AATCCAGATG GCTGTTGTCG GGGGAGGGTC TTTTCTGGTA
TCCTTATTCA GTAATGGTAT AACAGGTGTA ACCGGCCCGG CCCTGGGTGT TATAATTTAT
ACTGGTCTTC TGGCAACAGC CATGGCCTAT CTAATTCAGA GTTATGCCCA GCAGTTTACT
CCACCTACCC ATACCGGTGT TATATTTACT CTGGAACCAG TATTTGGAGC ATTATTCTCA
TATTTAATAC TGGGAGAAGT TATGGGATTT ACCGGTTTGT TCGGTGGATT ACTGATAGTG
ACCGGTATGT TGATTACAGA AGTGAAAGCT GAGGGGGTCT AG
 
Protein sequence
MLQKAKTKTR VIKADLLLLL VVTVWGTTFP VMKMILVDTD PFYFIALRFM VAFLALYLVF 
HKKVTRDDFS GETVRKGVIL GLCLLAGYAF QIVGLQYTTA SRSAFITGLS VVMVPLLSIM
IIKQIPGPYT WTGVALATIG LYLLTGAGKI AVNLGDYLTF FCAVSFALQI VLLSKYLPGN
KPVVLTLIQM AVVGGGSFLV SLFSNGITGV TGPALGVIIY TGLLATAMAY LIQSYAQQFT
PPTHTGVIFT LEPVFGALFS YLILGEVMGF TGLFGGLLIV TGMLITEVKA EGV