Gene Hore_05670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_05670 
Symbol 
ID7313539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp617042 
End bp618763 
Gene Length1722 bp 
Protein Length573 aa 
Translation table11 
GC content38% 
IMG OID643610997 
ProductDNA polymerase X family protein 
Protein accessionYP_002508319 
Protein GI220931411 
COG category[L] Replication, recombination and repair 
COG ID[COG1796] DNA polymerase IV (family X) 
TIGRFAM ID[TIGR01856] histidinol phosphate phosphatase HisJ family 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCAAT TAACCAATAA AGAAGTGTCC CGTATTTTGA AGGAACTGGC AAAACTTATG 
GAATTAAAGG GTGAGAATAA ATTTAAAGTA AGGGCATACT ATAATGCTTC CCGTCAGTTA
ATAAATATGT CTGATAATAT TCAGGATCTG GCCCGTGAGG GTAAGATAAG GAATATACCC
GGGGTCGGGG AGGGGATAGC AAGAAGTATT AAAGAGATTA TGGAAAAGGG GTATTCCCCT
GAACTTGAGG AGTTAAAGGC AGAATTACCC GGGGGGTTAC TTGAAATTAT TAAGATACCG
GGTCTTGGCC CAAAAAGGGC ATACCAGCTT TTTAATGAAC TTGGGGTTAC GAACCTTGAG
GAACTAAAAA GTGCTTTGAA TACTGGTAAA GCCAGGAAGT TAAAAGGCTT TGGTGTGAAA
ACAGAAGAAA ACCTTAAAAA TAAAATTGAA AAATATGAGT CTTTTAAAAA TACTTACCTT
CTCAAGGAAG CATTGGGGAT ACTGGATGAG CTGAAAAGGT ATATTAAGAA ATGCCCCGGA
GTATCCCGGG TCAAAATGAC AGGAGAGGCG AGAAGAAAAA AAGAACTGGT AAATTCTCTG
GAAATACTTG TAGCCAGTAA GGAAAAGGAA TCTGTTCTTG AATACTTAAG GAAGTTATCG
TTTGCAAAAA GTATAGAGGA AAAAGAAGAG AATGGATATT TACTTACCTT TGAGGATGAT
ATAAGAATTA AGGTTTTTAT TGTGCCTCCA GATATGTTTT GTTTTTATCT ATTCTATCTT
ACAGGTTCTA AAGACCATGT CCAGAAAATG GAAACCATAG CTGATGATGC CGGGTATCAA
TTAACAATTA AGGGTTTATA TAAGGATTCC AGCAAAATCA AGGTTAAAAA TGAAGAAGAA
ATTTATACTA CCCTCGGGGT CAGTTATATT ATCCCTGAAC TCCGGGAAAA CCGGGGTGAA
ATAACAGCCG GTTTTAAAAA TTGCCTGCCT GATTCTATAA ATTTAAGGGA TATAAAGGGT
GATCTCCATA TTCATTCCAG CTACAGTGAT GGTGGTTTTA GTATCAGGGA GATTATTGAA
GCTGCCCGGA AGAAGGGATA TGAATACCTG GCTATTACAG ACCATTCCCG TTCTTTAAAG
GTTGCCAGTG GTTTGAGTGT TGACAGATTA TTTAAGCAGA TTGAAGAAAT AGATAAACTT
CAGGAGGAAT ATGATGATAT AATTATTTTT AAGGGAATAG AGGTAGATAT AAATAAAGAT
GGTAGTCTTG ATTATAGTGA TGAGGTGTTA TCTTACCTTG ATTTTGTAAT TGCATCGGTT
CATACCGCTT TTAACATGGA TAGAGATAAG ATGACGTCAC GGCTAATTAA GGCAATGGAA
AACCCTCATG TTAATGCTAT AGGGCATCCA AGGGGAAGGC TTCTAAAAAG ACGTGACGCC
TATAAGATTG ACATGGACAG GATAATTCAG GTTGCATCTG AAACCAATAC CTGTCTTGAA
ATAAATTCTT CCCCGGATAG GCTTGATATC GATGATGTTC TTGCACGGAA AGCTAAAGAG
GTCGGAGTTA AGTTGGTGAT TAATACCGAT GCCCATCACC TTGAAGAATT GAATAATATG
TCCCTCGGGG TTGCTGTAGC CCGGAGAGGC TGGCTTGAAA GAGAAGATGT TATTAATACC
ATGAATGCAG AAGAGTTACA GGAATTATTA AGGAGGGATT AA
 
Protein sequence
MYQLTNKEVS RILKELAKLM ELKGENKFKV RAYYNASRQL INMSDNIQDL AREGKIRNIP 
GVGEGIARSI KEIMEKGYSP ELEELKAELP GGLLEIIKIP GLGPKRAYQL FNELGVTNLE
ELKSALNTGK ARKLKGFGVK TEENLKNKIE KYESFKNTYL LKEALGILDE LKRYIKKCPG
VSRVKMTGEA RRKKELVNSL EILVASKEKE SVLEYLRKLS FAKSIEEKEE NGYLLTFEDD
IRIKVFIVPP DMFCFYLFYL TGSKDHVQKM ETIADDAGYQ LTIKGLYKDS SKIKVKNEEE
IYTTLGVSYI IPELRENRGE ITAGFKNCLP DSINLRDIKG DLHIHSSYSD GGFSIREIIE
AARKKGYEYL AITDHSRSLK VASGLSVDRL FKQIEEIDKL QEEYDDIIIF KGIEVDINKD
GSLDYSDEVL SYLDFVIASV HTAFNMDRDK MTSRLIKAME NPHVNAIGHP RGRLLKRRDA
YKIDMDRIIQ VASETNTCLE INSSPDRLDI DDVLARKAKE VGVKLVINTD AHHLEELNNM
SLGVAVARRG WLEREDVINT MNAEELQELL RRD