| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_05190 |
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| Symbol | |
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| ID | 7313482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 566905 |
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| End bp | 568269 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643610942 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_002508272 |
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| Protein GI | 220931364 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.969197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAACATA AGAAAAGAGA TAAATTCAGT TACATAACCG AAGGGCCAAT ACTGGGGTCT
TTAGTTAAAC TGGCTTTACC TATTATGTTA AGCCAGTTGA TGCAGACATT ATATAACCCG
GTAGATACTA TCTGGGTTGG CAGGGTAGGA GCCAACGCAG TGGCTGCTAT TTCTATAAGT
TTTCCGGTGG TAATGCTTAT GGTGGCTCTC GGAGCCGGAT TAACCATAGC CGGAACCGCA
TTAATAGCCC AGCATAAAGG AGCCGGTAAC CAACAGGAAA TAAACAAAAT ACTGGGTCAG
CTTTTTAGTT TTATTGGGTC CTTTTCAGTT ATAATTGCCA TTGTAGGGTA TCTTTTATCC
AGAAAAATGG TTGTCTGGAT GGGGGCAGAT CCTTCAATAG TAAATGATGC TGCTCAATAT
TTAAAAATAA TATTTTCTGG TATTCCCTTT ATGTTTGGAT TTTTTATCTT TTCTTCAACC
CTGAGGGGGA TAGGGGATAC GCTAACACCC GCAGTTATGA TGTTTTCTTC GGTTATTTTA
AATATGGTAT TAGACCCTCT TTTTATCTTT GGAATCTGGA TTTTTCCTGA ATTAGGGGTG
GGGGGTGCTG CACTGGCAAC CATTTTATCC AGGGGAATTG TGGCTATCTG GGCTCTTTTT
ATGTTGCTTG GAGGTAATAA AGGCCTCAAA CTGATAAAAG TTAATATGAT TCCTGATTTT
AGCATAATAA AAAAGATAAT TAAGATAGGA ATACCGTCTT CTGTGGAACA ATCCATGATA
TCTCTGGGAC AGCTATTTAT GACAAAACTG GTTGCTTCTT TTGGGACTAT GACGCTGGCT
GCTTATGGTA TCGTAAACAG GGTTGTAAGC CTACCGGTAA TTCTGGCCTT CGGTGTAGCA
GCGGCTGCAA CTACCATGGT TGGGCAGAAT GTGGGGGCTG AAAAAAAGGA GCGAGCTGAG
AAAACAGCTC TGGTCAGTAA TCTAACCATT TTCATCAGTT TAACGGTAAT TGGATTTTTA
ATGATGGTTA AACCTGCACT GGTTATCAGT GTTTTTAATA AAGCCCCGGA GGTTTTAAAA
TACGGAAGTG ACTATTTGAA TATTATCGCC CTTACCTTTG GATTTACTGG AATTATGATT
GTCTCCAATG GTATTTTTAA AGGTGCCGGG CGGACAGTCC CGCCAATGGT CATTTCAATT
ATATCACAAT GGGGTTTTAG ACTATGGCTT GGCTTTTATC TATCCCGGGA CCTGGGCCTG
GAGCAGGCTG GTTTATGGTG GGCCATTGCC ATAGCCAATA TAGGGGGTGC CGTTATAGGT
GTTACCTGGT TAAAATTAAC TGACTGGAGT ACCGGGCGTT ATTAA
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| Protein sequence | MEHKKRDKFS YITEGPILGS LVKLALPIML SQLMQTLYNP VDTIWVGRVG ANAVAAISIS
FPVVMLMVAL GAGLTIAGTA LIAQHKGAGN QQEINKILGQ LFSFIGSFSV IIAIVGYLLS
RKMVVWMGAD PSIVNDAAQY LKIIFSGIPF MFGFFIFSST LRGIGDTLTP AVMMFSSVIL
NMVLDPLFIF GIWIFPELGV GGAALATILS RGIVAIWALF MLLGGNKGLK LIKVNMIPDF
SIIKKIIKIG IPSSVEQSMI SLGQLFMTKL VASFGTMTLA AYGIVNRVVS LPVILAFGVA
AAATTMVGQN VGAEKKERAE KTALVSNLTI FISLTVIGFL MMVKPALVIS VFNKAPEVLK
YGSDYLNIIA LTFGFTGIMI VSNGIFKGAG RTVPPMVISI ISQWGFRLWL GFYLSRDLGL
EQAGLWWAIA IANIGGAVIG VTWLKLTDWS TGRY
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