Gene Hore_04930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_04930 
Symbol 
ID7314472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp535485 
End bp536492 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content41% 
IMG OID643610916 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_002508246 
Protein GI220931338 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00159941 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCCAGAG AAAAACTTAT TGACGTAAAT AATCTAAAAA CGTATTTCTA CACCGAACAG 
GGTGTATCTA AGGCTGTAGA CGGTGTAGAT TTTGAGATAT ATCCTGGAGA AACACTCGGA 
TTAGTTGGAG AATCAGGTTG TGGGAAGAGT GTAACTTCTC TCTCGATTAT GGGGTTAATT 
CCTAACCCTC CGGGTAAAAT TGTTGATGGT GAAATATTAT TTAATGGTAA GGACCTGACT 
AAATTAAGCT ATGAGGAGTT AAGGCAGATC AGGGGTAATG ACATATCCAT GATCTTTCAG 
GAACCGATGA CCTCATTAAA CCCGGTTTTC ACGGTTGGTG ACCAGATTTC AGAGGCTATT 
TTAATTCATG AAGATGTGAC TAAAGAGGAA GCCATGGACC GGGCTGTAGA AATGCTTAGA 
AAAGTAGGTA TACCATTACC GGAACAGCGG GTAAATGAAT ATCCTCATCA GCTCAGTGGT 
GGAATGAGGC AGAGGGTTAT GATTGCTATG GCCCTGGCCT GTAATCCGAA GCTTTTAATT 
GCTGATGAGC CTACTACAGC CCTTGATGTT ACAATCCAGG CCCAGATACT GGACCTGATT 
AACGAGTTAA AAGAAAAATA TCAGATGTCT ATTATGATGA TTACCCATGA TCTGGGTGTT 
ATTGCAGAGA TATCTGACCG GGTAGCCGTT ATGTATGCCG GTAAAATTGT AGAATATACA 
GATGTAAAAA CCCTGTTTGA AGATCCAAAA CATCCCTATA CCTGGGGATT GATTAATTCA 
ATTCCAAAGA TGAATGAAGA GGTAGAACGA CTGGTAACTA TACCCGGTAT TGTACCCAGT 
CCTTATGATT TGCCGACTGG TTGTAGTTAT AACACAAGGT GTCCTTTGGC TGACGAAAAA 
TGCCGTAGTG AAGAACCGGT TATGGAAGAA ATCGCTGAAG GCCATAAGGT AAGATGCTGG 
CACTACGAGC GGGTAGCAGA ATTGAAACAA AAAATTGAAA CGGCTTAA
 
Protein sequence
MAREKLIDVN NLKTYFYTEQ GVSKAVDGVD FEIYPGETLG LVGESGCGKS VTSLSIMGLI 
PNPPGKIVDG EILFNGKDLT KLSYEELRQI RGNDISMIFQ EPMTSLNPVF TVGDQISEAI 
LIHEDVTKEE AMDRAVEMLR KVGIPLPEQR VNEYPHQLSG GMRQRVMIAM ALACNPKLLI 
ADEPTTALDV TIQAQILDLI NELKEKYQMS IMMITHDLGV IAEISDRVAV MYAGKIVEYT 
DVKTLFEDPK HPYTWGLINS IPKMNEEVER LVTIPGIVPS PYDLPTGCSY NTRCPLADEK 
CRSEEPVMEE IAEGHKVRCW HYERVAELKQ KIETA