Gene Hore_04310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_04310 
Symbol 
ID7313070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp462221 
End bp464290 
Gene Length2070 bp 
Protein Length689 aa 
Translation table11 
GC content36% 
IMG OID643610854 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_002508184 
Protein GI220931276 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAGTT TTCTAAAAAT TATAACAAAG CCTTTTTTGT ATTTAGTGAG ATTAGTTAAA 
TCCCTTGACA GATTTGTGAT AAAAATCCTG GGACGATTAA AAATAGGGAA AAGAATAATG
CTCTTTATAT TATTAATGAT AATAACTATT GTAGGTATTA GTTCTTATCA AATTTATAAT
TCTTATCTGA ATACTCTTGA AAACAACGAA CGGGAGAAAC TGCAGCAGGA TCTGAGGGTT
ATCAGTAACC AGTTAGAGCA GAGAAAAATT GAAGTCTCCA GTATCGCTGG TAGTCTGGCC
AAAATGCCCC TGGCCAGAAA AATTATATAT GATATGGAAT ATGACAAAAC ATACTGGGAG
TACATAATGG GACAGTTACA GGTCGATGGT ATAGAGATAA GGGATTTTGA TTTTGAATCG
GTGGCCAGGG TTGGTAATGT AGGTGTCGAT TTTGAAAAAA ATAATGAGTT GAAACAAAAA
ATTGTTGATC TAATTTTGTC AGGGGTGGAC GTAACTTTCT TTACCCATAA TGATAAATAC
ATACAGGTGA ATGCTGTAAG CAGTGTCATT GATGAATTCA GAATACCGGG CCTGGGTGGG
ATTATGGTTA GTAAATTTCT GGGGTCTGAA TTTATTAAAT TATTACCTTT TAATGATGAA
TATGGAGTTC AATTGTACTA TAATCAAAAA TTAATAGATA GCAACCAGAT AGGGTCAAAC
TTTAACGATG TAGCCTTGAT AACCAGTGAT ATTGAAAATA CCTTTAACAG TGGTTCTGAT
AGTTATTTAA TCTGTAAAAG AGAAATAAAT GGGGAAATAT ACTCGGTTGG TTATTTACCG
ATCAAAAACT TTTTTGGTAA ACCCATTGGT TATATTGTCT TGATACAATC CAGGGCAGGA
GTAGTTGGGA AAATAAATGA TATGTTCAGA CAGATTATTA TAAATTCACT GGTCATTATT
GGAATATCGT CTTTGTTTGT CTTGCTGATT ACCCAGAGCA TAACACATCC CCTCAACAAA
GTTATTGGAG GAGCCCGCCA GGTCAGTCAG GGAGACTTAC GGGTCACAAT TGAAGCAGAT
TCAAAAGATC AGTTTCTGGT TCTGTCTGAT AACTTTAATC AAATGGTCGC AAACCTGAAA
AATGTAGTTT CCAGCCTGTT ATATTCCTCT GATAATGTTT ATAAGATGTC ACAAAATTTA
TCAGCCAGTG TTCAGGAAGT CAGTGCTACT TCAGAGGAAG TAGCAGCGAC CAGTGAAAAG
ATTGCCCTGG GAGCTGAAGA ACAGGCTACT AAAACAAAGG AAACCGAAAA ACTTCTTGAT
AATATTAAGA AGGGAGCAGA AGATGTAAGT GAGAGTTCAG CTAAAATTGT TGAGGTTGTC
GATAATGTCC AGAAACAGTC AATAGATGGG TTAGATGTTA TTAAAAAAGC GAGAAATCAT
ATGGGGAAAA CCCTTGAAGA GTTAGATTTA ACAAATGAAG TAATTGATAA CTTAAGGGAT
AGCATCGATC AAATTAATAC AATCATTGAA GCAATTAATT ATATTAACGA AGAAACAACG
TTACTTTCTT TTAATGCAGC TATTGAAGCT GCCAGGGCCG GTGAAGCTGG CCGGGGGTTT
GCTATAGTTG CTGAAGAAAT CAGGTCGTTA GCCAACAGGT CCAATGAATC ACTGGATAAT
ATTATTTCTA TTTTTAGGCA GATAAAAGAT GCTATGCAGC AGGTAGAGGA TGCCATGGAT
AAAAGTCGTA ATAACATCAA GAGTAGTGAT CAGAATGTGG TTGACGTGTA TAAAGCCCTT
GAAGAAATGC AGAATGTAGT AGAAGAAGCA AAGAATGTCA GTATAGAAAT AGCTAAACAG
GCGAGAAGCC AATTAAAGGG TACAGAAGAT ATAGATAAAG TAGTTGGGGA AATTACAGAT
ATTGCTGAGG ATAACCTGTC AGGGTCCAGA CAGGCTGCCC AGATGAATCT GGAACAATCC
AAAGTAATTG AAGAAGTGGC CGAGGCTGCT GATGACCTTG CCGATATGGC AGAAAGCCTG
CAAAATATGA TTAAGAAGTT TAAATTATAA
 
Protein sequence
MFSFLKIITK PFLYLVRLVK SLDRFVIKIL GRLKIGKRIM LFILLMIITI VGISSYQIYN 
SYLNTLENNE REKLQQDLRV ISNQLEQRKI EVSSIAGSLA KMPLARKIIY DMEYDKTYWE
YIMGQLQVDG IEIRDFDFES VARVGNVGVD FEKNNELKQK IVDLILSGVD VTFFTHNDKY
IQVNAVSSVI DEFRIPGLGG IMVSKFLGSE FIKLLPFNDE YGVQLYYNQK LIDSNQIGSN
FNDVALITSD IENTFNSGSD SYLICKREIN GEIYSVGYLP IKNFFGKPIG YIVLIQSRAG
VVGKINDMFR QIIINSLVII GISSLFVLLI TQSITHPLNK VIGGARQVSQ GDLRVTIEAD
SKDQFLVLSD NFNQMVANLK NVVSSLLYSS DNVYKMSQNL SASVQEVSAT SEEVAATSEK
IALGAEEQAT KTKETEKLLD NIKKGAEDVS ESSAKIVEVV DNVQKQSIDG LDVIKKARNH
MGKTLEELDL TNEVIDNLRD SIDQINTIIE AINYINEETT LLSFNAAIEA ARAGEAGRGF
AIVAEEIRSL ANRSNESLDN IISIFRQIKD AMQQVEDAMD KSRNNIKSSD QNVVDVYKAL
EEMQNVVEEA KNVSIEIAKQ ARSQLKGTED IDKVVGEITD IAEDNLSGSR QAAQMNLEQS
KVIEEVAEAA DDLADMAESL QNMIKKFKL