Gene Hore_04060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_04060 
Symbol 
ID7314081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp419106 
End bp419984 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content40% 
IMG OID643610829 
Productcation diffusion facilitator family transporter 
Protein accessionYP_002508159 
Protein GI220931251 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones73 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGAGG AAGAGAGATA TAGAGAAACC AGGAAGGTCA GCTTTATTAG TATTGTTATC 
AATATAATAT TATCAGTAGC AAAAATATTT ATAGGTATCA GTTTTGCCAG TAAAGCATTA
CTGGCTGATG GGGTACATTC TGTTTCCGAT ATTGCCTCAA CGGTTGTGGT CTTAATAAGT
ATTAAGTTTT CCCAGAATCC AGCAGATGAA AGACACCCCT ACGGTCATGG AAAAGCGGAA
CAAATAGGGA CTGCTCTCCT TGGTCTTATG CTGTTAATTA CGGGTTTAAC TTTAATAAAA
GATACGGCTG GAAATATGAT AACAGGTGAA ATAACTGTTC CCGGGCAGAT TACCCTGTGG
ATAGCCTTAA TTTCAATTAT AAGTAAAGAA GCCCTGTATC AGTACACGGT TAAGATTGGT
AAGAAAATAA ACAGTAAAGG TTTGGTTGCC GATGCCCACC ACCACCGGTC AGATGCCCTG
TCTTCTGTGG CTGCCCTTGC AGGTATTGCC GGGGCCCGAC TTGGATATCC GTTCCTCGAC
CCCCTGGCCG GTTTGATAGT AGCCCTCCTT ATTATTAAAA TCAGTATAGA AATTATAAAA
GAAGCTGTTC ATGAGCTAAT GGATGGAATT CCTGATGAAG ATAAGATAGT TAAAATCAGA
AAAATAGCAG AGAATGTCAG TGGAGTAAAA GATATAGGTG ATATAAAGAT TCGCTCCTAT
GGCCCCCACC TTATTGTGGA CCTGACTGTT GCTGTTGATA AAAACTTAAA AGTAATTGAG
GGACATCAGG TGGCAGCAAA TATTAAAAAC GAATTACTGA ATAGTGATTC TAATGTGGAG
GATGTTCTGG TTCATGTTGA CCCCTGGCAG GAAGGATAG
 
Protein sequence
MMEEERYRET RKVSFISIVI NIILSVAKIF IGISFASKAL LADGVHSVSD IASTVVVLIS 
IKFSQNPADE RHPYGHGKAE QIGTALLGLM LLITGLTLIK DTAGNMITGE ITVPGQITLW
IALISIISKE ALYQYTVKIG KKINSKGLVA DAHHHRSDAL SSVAALAGIA GARLGYPFLD
PLAGLIVALL IIKISIEIIK EAVHELMDGI PDEDKIVKIR KIAENVSGVK DIGDIKIRSY
GPHLIVDLTV AVDKNLKVIE GHQVAANIKN ELLNSDSNVE DVLVHVDPWQ EG