Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_03980 |
Symbol | |
ID | 7314073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 407810 |
End bp | 408982 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643610822 |
Product | putative transmembrane anti-sigma factor |
Protein accession | YP_002508152 |
Protein GI | 220931244 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00000793446 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCATC AGAAACTTAA AGACCTTTTA CCCCTGTATG TGGATAACGG GTTGAATGAT GAGGAGAAAA ACCTGGTGGA AAAACATTTA AAAGAATGTG AGGAGTGCCG CAATGAATTG AAACATTACC GGCAAAATTT TAATATACTT TCCTCAACTG AGGGGGTTGA GCCCCCACAG GATATAGTTG AGTCTGTCAT GGAGGGACTT AATAACCTGG ATTATAATAT AGATAAAGAA CAGGAGCAGA ATACCTGGTC TGATAAACTC CTTAATCTCT TTAGACTAAA GGTAAGGATA CCAGTTGGGG CAGTTGCTGT GGTAGTAGCA ATTATCCTGA GTATAGCTTT ATTTTCACCC GGCATATATA ATTCCTATCA GAATTACAGT CTCTCCCGGG AAGAAATGGA GATGGGACAG GAAGCAGCCC CGGAACAGGA TCTTAAGATG GCCCGTGACC GAACCATGAA CAGGACAAAC CTCAATCAAT CTTCACCCAA TACTAATCAG GAAGCAGGAC TGGATCGGAA GATTATTCAA AATGCCAGTC TGGAGATTGA GACCGATGAT TTTGCAGAGG TCAGCAAGGT GGTTACCGGA CTGGTTACCA GCTATGAGGG CTATATTGCT AGTTCTACAA ACTGGGTTAC TGCTTCTGGA CAGAAAAAGG TCAGTTTTAC TTTAAGAATT CCAGAAAATC ATTTCCACAT GGTACTGGAA CAGATTAAGA ATATGGGGAG AGTTAAGTAT AGTAGCCTGG GGAGCCGGGA TGTCACCGAG GAGTTTATCG ATGTTGAAGC CAGGCTTGAC AACCTGAAAG AACAGGAGAT AAGATACCGT AAACTCCTTG ACAGAGCCGA TAAAGTAGAG GATATTCTTA AAATTGAACG GGAACTGGAA AGGGTCCGCA GTACTATAGA GAGTCTGGAA GGGCGAATTG AGTATCTACA AAACCGGGTT TCATTTTCAA CCATAAATGT TGTCTTCATG GAACCGGAAT CAATTATGAA TAGTAACCGG GGGATAATTG GTGCATTACG CCAGGCCCTG AGGGCGATGG TTGAAAGTTT TTACAACCTG ATTATCAAAT TAGGTGCCTG GTTACCATAT ATGCTTCCCC TGGTGGCAGG ATATTTTATA TACCGGAGAC ATAAATTAAA GAATAAAGAG TAG
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Protein sequence | MNHQKLKDLL PLYVDNGLND EEKNLVEKHL KECEECRNEL KHYRQNFNIL SSTEGVEPPQ DIVESVMEGL NNLDYNIDKE QEQNTWSDKL LNLFRLKVRI PVGAVAVVVA IILSIALFSP GIYNSYQNYS LSREEMEMGQ EAAPEQDLKM ARDRTMNRTN LNQSSPNTNQ EAGLDRKIIQ NASLEIETDD FAEVSKVVTG LVTSYEGYIA SSTNWVTASG QKKVSFTLRI PENHFHMVLE QIKNMGRVKY SSLGSRDVTE EFIDVEARLD NLKEQEIRYR KLLDRADKVE DILKIERELE RVRSTIESLE GRIEYLQNRV SFSTINVVFM EPESIMNSNR GIIGALRQAL RAMVESFYNL IIKLGAWLPY MLPLVAGYFI YRRHKLKNKE
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