Gene Hore_03380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_03380 
Symbol 
ID7314726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp350729 
End bp353161 
Gene Length2433 bp 
Protein Length810 aa 
Translation table11 
GC content38% 
IMG OID643610763 
Productpeptidase S16 lon domain protein 
Protein accessionYP_002508094 
Protein GI220931186 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1067] Predicted ATP-dependent protease 
TIGRFAM ID[TIGR00764] lon-related putative ATP-dependent protease 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGAGATA TAAAAAATTT AAAACCAGAG GAATTGAAAA ATGAAATTGA TCCTGACCTT 
TTTTCGTTTA AAACTACCGA GGAAATAACC CCTTTTACCA GTGGTATAAT TGGCCAGAGC
CGGGCTGTTA AGGCTATGGA TTTTGGGCTA AGGGTCAAAC AGGAAGGGTA CAATATTTAT
ATGGCTGGAA TAACCGGAAC GGGTAAAACC ACCTATGCCA GAACCCTTAC TAGAAGGGAG
TCAAAAAAAC ACCCTGTTCC CCCTGATCTC TGCTATGTAT TTAACTTCGA AGAACCTGAA
AAACCACGGG CTTTAAAATT ACCTGCCGGG ACAGGTATAC ATCTAAAAAA AGATATGGAC
AATATTATTG AGGAGCTGAA GGTAGAAATA CCTAAAATAT TTGAGAGTGA AGAATATGAA
GAACAGAAAA ACAGGATAAT GAATAGATAC CAGCAGCTGT CAAATCAGAT TATGGAGGAA
TTTGAAATTG AAGTCAGGGA TAAAGGCTTT ATTCTGCAGC AGACTGTTCA GGGGCCGCTA
ACTGTACCCA TTGATGAAGA TGGAAACCCT ATAACCCAGG AAGATTATCA AAGTTTACCT
GAAGATAAAC GAAAAGAAAT AAGGGAAAAA AACCAGGAAA TCCAGAACAA AATGGATGCT
ATTATGAAGA AAATAAGAGG ATTGAAAACC GAGGCCCAGG AAGAGTTAGA AAATCTGGAA
AAAAGTATGG TTTTATCTGT GGTAAAACCT ATAATAAATC ATCTGAAAGA AGAGTATCGT
TTCTGTCAGG ATATATTGGA TTATCTGGAT GATGTCAAGA ACGATATAGC CAAGAATCTG
GGGATGTTTA AAGGGGATAA TAAGAATAAA GAGGCAAAAA AAGCCTCTCT TCCTTTTACA
ATGGAAACAG GTGATGATGA CTTTTTTGTC CGTTATAAGG TTAATTTACT GGTAAACAAT
AGGGATACTG AAGGGGCTCC CGTCATTGTA GAAACAAATC CAACTTATTA TAATTTATTC
GGCAAAATTG AGGGAAGAAG CCAGTTTGGA ACAGTTACCA CAGATTTTAC GATGATTAAG
GGAGGTGCCA TTCATAAAGC TAATGGTGGG TATTTGATTC TTAAAGCAAA GGATATATTA
CGTAATCCCT ATGCCTGGGA AACACTTAAA AGGACCCTCA TAAACCAGAG AATAGTGGTT
GAAAATATCG GGGAACAATA CCGGACTGTT CCGGTATTAA CCTTAAAACC GGAGCCCTTT
GATATTAAAT TGAAGGTAAT AATGATAGGT AATCCTATGA TATACCAGCT TTTATATAAC
CATGATGAAG AGTTTCAAAA ACTATTTAAA ATCAGGGCCC ATTTTGATGT AGAGATGGAA
AAAAATAATG AAAATATAGA GAAGTTTGCT TCCTTTATTG CTTCTGTAAG TAACCGTGAA
GGAATCAAAC ACTTTACAGC CGGGGCTGTT GCTGAGGTAA TCAGCTATAG CAGCCGGCTT
GCTGGAAAAA AAGATAAGTT ATCCACCAGG TTTAATCAGA TAATAGAAAT ATTATATGAG
GCCAGCACCT GGGCTGAACT TGACAATTCC AGTTATGTAG AGGCAAGCCA TGTTATCAAG
GCTGTTGAAG AGAAAGAGAG AAGGGCAAAT TTAGTTGAAG AAAAGATGCA GGAAATGATT
GAAAAAGAGC AAATATTGCT TGATGTGACC GGGGAGAAGG TCGGGCAAAT TAATGGTTTA
TCGGTAATAC AGACCGGCGG TTATTCCTTT GGCCGTCCTT CCCGGATAAC AGCCCGGACC
TTTATGGGAC GGAAAGGTGT TATAAATATT GAGAGGGAAG CTAAAATGAG TGGCAAGATT
CACAACAAAG GGGTTTTAAT TCTTTCTGGT TTTCTTGGTG GTAAATATGC CCGGGAAAGA
CCCCTGACCC TGTCAGCTTC ACTGGCGTTT GAGCAAAGTT ACAGTGGGGT AGATGGTGAT
AGTGCCACCT GTGCTGAATT GATTGCCCTA CTATCGGCCC TGACCGGATT ACCGGTAAAA
CAGAACCTGG CTATAACCGG TTCCCTTAAC CAGAAGGGGA TGGTGCAACC GGTGGGAGGA
ATTAATCAGA AAATAGAAGG TTTTTATAAG GTCTGTGAAG CAAAAGGTTT AACTGGAAAG
CAGGGAGTCA TTATTCCGGA ACAAAATACA GATAATTTGA TGTTAAAAGA AGATGTTATT
GCTACTGTAA AAAGAGGGGA ATTTCATATA TATTCTATTA AGGAAATAGA TGAAGCTATA
GAGCTGATGT TTGGTCTTTC TGCCGAAGAG GTACACACTA AAGTTGAAGA GTCCCTTGAT
AAAATTAATG AAAAGGCCAG AGAATTTAAC AGAGAGTTTA AAGAGGGGCG CAAAAAAGAA
GAATTGGCAA AAATAATTAT TAAATATTAT TAA
 
Protein sequence
MRDIKNLKPE ELKNEIDPDL FSFKTTEEIT PFTSGIIGQS RAVKAMDFGL RVKQEGYNIY 
MAGITGTGKT TYARTLTRRE SKKHPVPPDL CYVFNFEEPE KPRALKLPAG TGIHLKKDMD
NIIEELKVEI PKIFESEEYE EQKNRIMNRY QQLSNQIMEE FEIEVRDKGF ILQQTVQGPL
TVPIDEDGNP ITQEDYQSLP EDKRKEIREK NQEIQNKMDA IMKKIRGLKT EAQEELENLE
KSMVLSVVKP IINHLKEEYR FCQDILDYLD DVKNDIAKNL GMFKGDNKNK EAKKASLPFT
METGDDDFFV RYKVNLLVNN RDTEGAPVIV ETNPTYYNLF GKIEGRSQFG TVTTDFTMIK
GGAIHKANGG YLILKAKDIL RNPYAWETLK RTLINQRIVV ENIGEQYRTV PVLTLKPEPF
DIKLKVIMIG NPMIYQLLYN HDEEFQKLFK IRAHFDVEME KNNENIEKFA SFIASVSNRE
GIKHFTAGAV AEVISYSSRL AGKKDKLSTR FNQIIEILYE ASTWAELDNS SYVEASHVIK
AVEEKERRAN LVEEKMQEMI EKEQILLDVT GEKVGQINGL SVIQTGGYSF GRPSRITART
FMGRKGVINI EREAKMSGKI HNKGVLILSG FLGGKYARER PLTLSASLAF EQSYSGVDGD
SATCAELIAL LSALTGLPVK QNLAITGSLN QKGMVQPVGG INQKIEGFYK VCEAKGLTGK
QGVIIPEQNT DNLMLKEDVI ATVKRGEFHI YSIKEIDEAI ELMFGLSAEE VHTKVEESLD
KINEKAREFN REFKEGRKKE ELAKIIIKYY