Gene Hore_03350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_03350 
Symbol 
ID7314721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp346043 
End bp348031 
Gene Length1989 bp 
Protein Length662 aa 
Translation table11 
GC content35% 
IMG OID643610758 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_002508091 
Protein GI220931183 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTAATT TTAACCTAAG AATTAAATCA AGATTAATGT TAATAATGGT ATTGTTGGTT 
GTTATGGCAG TAGCCAGTAT TGGCATTTAT TCATATACAA CAATAAAAAA ATCTTTAAAG
TTGGCTGCCC ATCAGGATTT AATCGAAACC ATTGATGTTA ATAGGGAAAG ACTAAGTAAA
TGGTTAAAAG AACTGGACAG GGGTATTTAT AAGTTAACAG AAGATACTAT GTTAACTTCC
ATGACATCCA GTACCCTGTC CCGGGTTAGA ATTAATTATC ATTTAAATTA TTTAAAAGAA
TTTGATCATT TACTGGTACT GGATAATGAA GGCAAGGTTT TTGTAAGTAG CAATGAAGGA
GATAAGAACA AAAAACTCAA TATTAAAGAA CATAAAATTT ATACCAGCAT TAAAAATATA
AAAGATTCCT TCAAGGGAGT TGCTGTTTCT CCCTTTACCG GAAATAATTC ATACATAATT
GCCTATCCTA TTATTAAAAA TGATAAAATA AATGGCCTGG TGGTTGGTTT AATTGAGTAT
GAGCATTTTT ATAATAAGTT ATCTGATTTT CAGACAAGTG AGGAATACGA GTATGTTATT
TTAAATGATG AAAACAGGGT TATATTTAAA AAAAATGAAA AAGTGCTATT GAAACCATAC
TTTGAAGAGG ATACTAGAAA CTATAGAGTT AATAAACCTT TCACCTATAA CTATAATGGT
AACACCTATT TTGGTCTGAT GGCAAAACTT AATGATAGTA ACTGGAAATT AGTAATAGCC
AAAAATCATG TAAAGGTTTT TGGTCCTCCA ACAGACCTCA GGAATAAGAT AATTATTTTT
GGTGGAGCTA TAATCATTAT TGCTATTACT ATTTCATTTA TACTCGGTAA CAGTATTGGT
AAAAGAATTA AAACACTTTA CAAAAATACA GATAGAATCA GCAACGGTGA TTTAACGAGT
ACAGTAAGCC TCAATAGTAA AGATGAATTA GGTGACCTGG CTGATAAATT AAACCAGATG
GTTTTTGATT TAAGGGAGAT AGTTTCAGAC ATTGATAAGG GTTCCCGGGA TGTTACTAAA
GCTTCCAGAG ATCTGAATAC AGGCCTGGAA AGGGTTACTG ATTCAGCTGA ACAGGTCTCT
AAAGCAATTG AACAGGTAGC TTCTGGAGCA GACGATCAGG CGGCAAATTA TGAGAAGATT
GTAGAAATAG TAAATGATAT GGTTGATGAA ATAAATATAA TGGTTAAAAA TAATAATATA
ACCCTGGATA ATGTCGAGAA ATCCCTGGCA TCGGTAAAAG AAGGTAATAA ATGGATGACA
CAGTTAAAAT CACAGATGGA TATAATTAAC GAGAAGGTCC AGGCTATGAC TTCTATTATA
GATAAAATGG ACAAAACCTC TTCTCGAATA GGTGAGATTG TAGAAATAAT TAATAATATA
GCCCAACAGA CCAATTTGCT GGCTTTAAAT GCTGCTATAG AGTCGGCCAG GGCTGGTGAA
GCTGGAAGAG GCTTTAGTGT AGTTGCTGAT GAAATCAGGA GTCTGGCAGA AGAATCCATT
TCTTCTGCTG AAAAAATAAC AAATCTGGTT AAAGAGACCC AGAACAATAC TGAAGAAGCC
CGCCGCTCGA TGTTAGCTGA AAAAGAGGCG GTTAACCGTG GTGAAGAACT GGTGGAACAG
ACTGGCGAGA TCTTTTCCAC AATAAAAAAT GTTATTGAGA GAACCCATCA GAATGCCAGG
AAGTCCAATG AAATTTCAAA AACCCTGGCA GAGGGGGCCC AGAATGTTGA AGAAAAAATA
GAATCGCTGG CCAGTATTTC CCAGGAGATT TCAGCATCAA GTCAGGAAGT GGCTGCCTCT
GCTGAAGAAG AGGTAAAATT AATACAGGAT ATGAACCGGG CTGCAGATGG TTTACAGGAA
CTGGCCCGCA AAATGCAATC AATGATTAAT AAATTTGAAC TGGGTCAAGA AAACCAGGAA
AAAGAATAA
 
Protein sequence
MINFNLRIKS RLMLIMVLLV VMAVASIGIY SYTTIKKSLK LAAHQDLIET IDVNRERLSK 
WLKELDRGIY KLTEDTMLTS MTSSTLSRVR INYHLNYLKE FDHLLVLDNE GKVFVSSNEG
DKNKKLNIKE HKIYTSIKNI KDSFKGVAVS PFTGNNSYII AYPIIKNDKI NGLVVGLIEY
EHFYNKLSDF QTSEEYEYVI LNDENRVIFK KNEKVLLKPY FEEDTRNYRV NKPFTYNYNG
NTYFGLMAKL NDSNWKLVIA KNHVKVFGPP TDLRNKIIIF GGAIIIIAIT ISFILGNSIG
KRIKTLYKNT DRISNGDLTS TVSLNSKDEL GDLADKLNQM VFDLREIVSD IDKGSRDVTK
ASRDLNTGLE RVTDSAEQVS KAIEQVASGA DDQAANYEKI VEIVNDMVDE INIMVKNNNI
TLDNVEKSLA SVKEGNKWMT QLKSQMDIIN EKVQAMTSII DKMDKTSSRI GEIVEIINNI
AQQTNLLALN AAIESARAGE AGRGFSVVAD EIRSLAEESI SSAEKITNLV KETQNNTEEA
RRSMLAEKEA VNRGEELVEQ TGEIFSTIKN VIERTHQNAR KSNEISKTLA EGAQNVEEKI
ESLASISQEI SASSQEVAAS AEEEVKLIQD MNRAADGLQE LARKMQSMIN KFELGQENQE
KE