| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_03140 |
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| Symbol | |
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| ID | 7314700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 321405 |
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| End bp | 324773 |
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| Gene Length | 3369 bp |
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| Protein Length | 1122 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643610737 |
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| Product | DNA polymerase III catalytic subunit, DnaE type |
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| Protein accession | YP_002508070 |
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| Protein GI | 220931162 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.677635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCAA ATTTTGTCCA CCTTCATGTC CATACTGAAT ATAGCCTCCT CGATGGCGCC
ATAAGGTTAA AAGACCTGGT CAAAAAGACA AAAGAATATG ATATGCCCGG TGTAGCTATT
ACTGACCATG GTGTCCTCTA TGGGGCTATT GATTTTTATA AACTGGCCAG GCAATATGGT
ATTAAACCGA TTATCGGATG TGAAGTCTAT CTTACCCCTT CTTCATTCCG GAAAAAAGAT
ACCCGTGAAA GATACCACCT GCTTCTCATT GCTCAAAACC GGGAGGGTTA TCACAATTTA
ACAAAAATCG TTTCCCGCTC CTGGCTTGAG GGGTTTTACT ATAAACCCCG GGTTGATAAA
GATTTGTTAT ACCAGCACCG TAAGGGTTTG ATATGTCTGT CTTCCTGCCT GCAGGGGGAA
ATTCCCCAGT TAATTTTAAA GGACAGGCTT CAGGAGGCAG AACAGGCCAT CAAAGAATAT
GAAGCTATTT TTGGCAGGGA AAGTTTTTAT CTGGAGTTAC AGGATCATAA CCTGGGTGAT
GAAAAACTGG TTAATTCCAG GTTGATTGAG CTTTCAAACA AACTGGGAAC CCCACTGGTG
GTTACCAATG ATTCTCATTA TCTCAATAGA GAAGATGCCT CCCTCCATGA TGTCTTACTG
GCAATGCAGA CCGGAAAGAC TATTAATGAT GAAAACCGTC TTTCTTTTAC AGGAGAAGAA
TTTTACTTCA AGTCTCCGGA TGAGATGAAA TCCCTTTTCC CGGACATAGA GGATACCTAT
TTAAATACTG TAAAAATTGC CGAGATGACG GATATTGATT TTGATTTTAA CACCTTTTAT
ATCCCTGACT TTCCTGATGC TAAAGGGGAT AAAACCCCTG TAGAGATACT AAGGGATAAA
TGCCAACAGG GTTTGAAAGA AAAGGGTTTA GAGGATAATA AAGAAGCAAG AGAACGGCTC
CAGTATGAGC TGGAGATCAT AGAAGAGATG GGCTATGTAT CTTATTTTCT AATAGTCTGG
GATTTTGTCA ATTTTGCCCG CCAGAAAGGG ATAAGGGTAG GACCAGGTCG GGGTTCTGCA
GCCGGTAGCC TGGTATCCTA CCTGTTGGGG ATAACCAAAA TAAACCCCCT GAAATATGGT
TTGATTTTTG AGAGGTTTTT GAATCCGGAA AGGGTAACAA TGCCCGATAT TGATATAGAT
TTTGATGAAC GCCGTGATGA AATAATTGAA TATGTCAAAC AGCGCTATGG TCGGGAAAAA
GTAGCCCAGA TTGGCACATT TGGAACAATG GCAGCCCGGG CTGCTATCAG GGATGTCGGT
CGGGTTCTTG ATATTCCTTT AAGGAAAGTT GACCGGATTG CAAAAATGGT TCCGGGCCGG
GTTACTATAA AAGAAGCCCT TAAAATGAAT GATAATCTAA ATAAATTATA TCAGCAGGAT
AGTGAAGTAA AACGACTTCT GGACTATGCG TGTCGTGTTG AGGGAATGCC CCGTCATATT
TCTACCCATG CCGCCGGGGT TATCATTGGT CCCGGGGATT TAAGTAATAT TATTCCTCTC
CAGACCCAGG ATGAGAACAT TATTACCCAG TTTCATATGG AGAATCTTGA GGAACTCGGG
TTATTAAAGA TGGATTTTCT GGGATTGAGA AACCTGACTA TCATTAATAA GACCCTGAAT
TTAATTTCAA AAAGATATGG CCGGGAAATA GATGTAGATA ATATCCCTCT CAATGATGAT
CGCGTTTATA AAATGCTACA GGAGGGTAAA ACCCCGGGTG TATTTCAGAT GGAGTCAAGG
TTATTTCAGG ACCTTAACCG TCGTTTAAAG CCAGAAAAAT TTTCGGATTT GATAGCCCTC
CTGGCCCTGG GGCGCCCCGG ACCCCTGGGC AGCAATCTGG TGGAACAGTA TATAAAAAGC
AGGCACGGTG AAATTGAACC TTCATATTTA CACCCTGAAC TGGAACCTAT TCTTGAAGAA
ACCTTTGGTT TAATTTTATA CCAGGAACAG GTCATGGAGA TAGCCAGCAA ACTGGCCGGT
TATACCATGG GTGAGGCTGA TTTATTACGC AGGGGGATGG GAAAAAAGAA AAAAGAGTTA
ATTAGTAAGG AACGGGAACG CTTTGTTGAA GGAGCGGTTA AGAACGGTAT TGAAAAGGAA
GTAGCCCATA AAATCTTTGA TCAGATGGAG TATTTTGCCG GTTATGGCTT TAATAAATCC
CATAGTACTG CCTATGCCAT GCTGGCCTAT CAGACGGCAT ATCTAAAGGC AAATTACCCG
TCTGAATTCA TGGCAGCTCT CCTGTCAACG GTTATGAATA ACCTGGATAA GGTTGGTCAG
TATATCAGGG AATGCCAGGA GATGGGGTTA AGGGTACTTC CTCCTGATGT GAACAGGAGT
GGTTTTGAGT TTGAAACAAC CCCTGATGGG GATATAAGTT TTGGCTTGAA GGCAATCAAG
AATGTCGGTA TTAAAGCTAT TGAGGCTATT ATTGAGGAAC GGAACCGGAA CGGAAATTAT
AGTTCCCTGG AAGATTTTAT AGAAAGGGTA GATACAGGCA GGGTAAATCT GCAGGTTATC
GAATCTCTTA TAAAGGCAGG TGTTTTTGAT AGCTTTAATA CTTACCGTTC TCAGATGCTT
ATAAAATATG AAGAAATTTA TGAAAAACTG GGTAGCAGGT CCCGTAACCG GGCCCAGGGT
CAGACATCAT TTTTTGACCT TTTTTCTGAA GATGAAAAGT TCTATAATCA GTCTATTGAA
TATCCAGAAA TTGAAGAATT ACCCCTTGAA GAAAGGCTTA ATCAGGAAAA AGAGTATCTG
GGTATTTACC TTTCCGCTCA TCCCCTCGAT CCTTTTAAGG ATAAGATAGA TCATTTTATT
TCGACAACCA GTCAGGATAT AAAAGATTAT GAAGGGGATA AGGTGACAAT CGGTGGTGTT
GTGGTTGATT TTAAGGAGCA TATTACCAGG ACAAATAAGA AAATGGCCTT CTTGACTTTG
GAGGATTGGT TGGGTAATAT TAAGGTAGTC GTTTTCCCCG ATCTTTATAA TCAGCTGGAT
ATTAATCTGG AAAAAGGTTT AAAACTTCTG ATTACCGGTA GGGTAGATGA TGGTAGTGTT
ATTTCTAATA AAATAATATC CCTTGAGCAG GATTTTATTG AAATAGATGT AACTTCTCTG
GATAGTGATA AACTTAAGGA ATTAAAAAAT CTTTGTCAAC AATACAGAGG GGACTGTCCC
CTGTTCATAA ATGTTGGGGA TACCTGCTTG TTGAGCGGGA TAAATTACTG GGTATCTGAC
GGGGGAGCCT TCTTACAGAA GGCAAAAAAA CTTGTTGGGA TAAATAATGT AAAGATATGG
TCATCATAA
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| Protein sequence | MTANFVHLHV HTEYSLLDGA IRLKDLVKKT KEYDMPGVAI TDHGVLYGAI DFYKLARQYG
IKPIIGCEVY LTPSSFRKKD TRERYHLLLI AQNREGYHNL TKIVSRSWLE GFYYKPRVDK
DLLYQHRKGL ICLSSCLQGE IPQLILKDRL QEAEQAIKEY EAIFGRESFY LELQDHNLGD
EKLVNSRLIE LSNKLGTPLV VTNDSHYLNR EDASLHDVLL AMQTGKTIND ENRLSFTGEE
FYFKSPDEMK SLFPDIEDTY LNTVKIAEMT DIDFDFNTFY IPDFPDAKGD KTPVEILRDK
CQQGLKEKGL EDNKEARERL QYELEIIEEM GYVSYFLIVW DFVNFARQKG IRVGPGRGSA
AGSLVSYLLG ITKINPLKYG LIFERFLNPE RVTMPDIDID FDERRDEIIE YVKQRYGREK
VAQIGTFGTM AARAAIRDVG RVLDIPLRKV DRIAKMVPGR VTIKEALKMN DNLNKLYQQD
SEVKRLLDYA CRVEGMPRHI STHAAGVIIG PGDLSNIIPL QTQDENIITQ FHMENLEELG
LLKMDFLGLR NLTIINKTLN LISKRYGREI DVDNIPLNDD RVYKMLQEGK TPGVFQMESR
LFQDLNRRLK PEKFSDLIAL LALGRPGPLG SNLVEQYIKS RHGEIEPSYL HPELEPILEE
TFGLILYQEQ VMEIASKLAG YTMGEADLLR RGMGKKKKEL ISKERERFVE GAVKNGIEKE
VAHKIFDQME YFAGYGFNKS HSTAYAMLAY QTAYLKANYP SEFMAALLST VMNNLDKVGQ
YIRECQEMGL RVLPPDVNRS GFEFETTPDG DISFGLKAIK NVGIKAIEAI IEERNRNGNY
SSLEDFIERV DTGRVNLQVI ESLIKAGVFD SFNTYRSQML IKYEEIYEKL GSRSRNRAQG
QTSFFDLFSE DEKFYNQSIE YPEIEELPLE ERLNQEKEYL GIYLSAHPLD PFKDKIDHFI
STTSQDIKDY EGDKVTIGGV VVDFKEHITR TNKKMAFLTL EDWLGNIKVV VFPDLYNQLD
INLEKGLKLL ITGRVDDGSV ISNKIISLEQ DFIEIDVTSL DSDKLKELKN LCQQYRGDCP
LFINVGDTCL LSGINYWVSD GGAFLQKAKK LVGINNVKIW SS
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