Gene Hore_02870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_02870 
Symbol 
ID7314673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp291474 
End bp292844 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content38% 
IMG OID643610710 
ProductFerredoxin hydrogenase 
Protein accessionYP_002508043 
Protein GI220931135 
COG category[R] General function prediction only 
COG ID[COG4624] Iron only hydrogenase large subunit, C-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.417058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGAAA ATTCAAATTA TCAATCCTTA AGAAAAGATA TTTTTAAACA ACTCTGCAAA 
GATTTATATA ATGACCAGAT CAAAAAGACT ATTAACAATC TTCCATATCA ACTCACAAAA
AAAGATAGTC ATGAAGAACT CGACCTTATT AAAAATGAAA TACTCCTGGC TATGGGTCTA
AATCCTACTG CAAAAAATGA CACAGAATTA TCAGCTGAAT TGAATACGGC CCTTAACTTA
AAAGAAGTTA AACAGCCGGT AGTTACAGTT AATCGAAAAA TCTGTGACCT CTGCCAGAAA
AAATATGGAC CAGATTATTG CAGAGTTGGG TGTGATATTA ATGAAAAAGA AGGACTATTA
ATTGAAGACG GACGTTGTAT TTCCTGTGGT AAATGCATTC CAAAATGTCC CCTTGAAGCT
GTTTCTGATA AGGTTGAATT TTTTCCCCTC TATAAATACC TTAAAAACGA TACCCAGGTT
TATGCAAATG TGGCCCCGGC CATTATGGGA CAGTTTGGTG AAAAGGTCAC AGCCGGACAC
CTCCGGAGTG CTTTTAAAAA AATTGGATTT ACCGACATGG TAGAAGTGGC CCTCTTTGCT
GATATAGTTA CTTTAAGAGA AGCGGATGAA TATAACCGCC TTGTGCAGAA AGAGGGTGAT
TTTATGATTA CAAGTTGTTG CTGCCCGGTA TGGGTAAATA TGGTAACAAA ACATTACCCC
TCGTTAAATA ACCATCTAAC CAGGACCGTA TCCCCAATGA TAGCCTCCGG AAGATTGATA
AAGCTACTTT TTCCTGATGC CATAACTGTA TTTATTGGCC CCTGCATTGC CAAAAAAGCA
GAGGCGAAAC ATCCTGAATT AAAGGGTGCC ATTGACTTTG TCTTAACCTT TGATGAATTA
GATCTCATTT TTGAAGCCCT TAATATTGAC CCAGCAAGAC TACCTGAAGA TAATAAAGAA
CAGTCATCCA GAGGAGGTAG AGTCTATGCC CGGACTGGAG GAGTCAGCCA GGCAGTTTCT
GATACAGTTA AGCGGCTTTC TCCCCATGAG CATGTAAAAT TTAAAGCAAA TCAGGCCGAT
GGGGTAAAAA ACTGCAAAAA GTTGCTTGAT GAATTAAAAG AAGGTAAAGT TGAGGCTACA
TTTATAGAGG GAATGGGCTG TGAGGGAGGA TGTGTCGGTG GACCAAAAAG AATTAATGAT
ATTAAAGAAG CTACCAGGCT TGTAAACAAA TTCGGCAGTA AAGCCCGGTC TCAAACCCCT
ATTGATAACA ATAACATATA TCACATTTTT AATTACCTAA CACAGCTTAT AGAATCCCAG
GAACAAATAA TTGATGAAGA AACATATGAT AATATTCTGG TAAGGAAATA A
 
Protein sequence
MIENSNYQSL RKDIFKQLCK DLYNDQIKKT INNLPYQLTK KDSHEELDLI KNEILLAMGL 
NPTAKNDTEL SAELNTALNL KEVKQPVVTV NRKICDLCQK KYGPDYCRVG CDINEKEGLL
IEDGRCISCG KCIPKCPLEA VSDKVEFFPL YKYLKNDTQV YANVAPAIMG QFGEKVTAGH
LRSAFKKIGF TDMVEVALFA DIVTLREADE YNRLVQKEGD FMITSCCCPV WVNMVTKHYP
SLNNHLTRTV SPMIASGRLI KLLFPDAITV FIGPCIAKKA EAKHPELKGA IDFVLTFDEL
DLIFEALNID PARLPEDNKE QSSRGGRVYA RTGGVSQAVS DTVKRLSPHE HVKFKANQAD
GVKNCKKLLD ELKEGKVEAT FIEGMGCEGG CVGGPKRIND IKEATRLVNK FGSKARSQTP
IDNNNIYHIF NYLTQLIESQ EQIIDEETYD NILVRK