| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_02060 |
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| Symbol | |
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| ID | 7312525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 211497 |
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| End bp | 213212 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643610628 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002507962 |
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| Protein GI | 220931054 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4624] Iron only hydrogenase large subunit, C-terminal domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTCTGG TAATAACAAG TGAGGCTAAA TGCAGAGATT GTTATAAGTG TATACGGTAT
TGCCCGGTTA AAGCTATTGG GATCAAGGAT GGGCAGGCCT GGGTAGATGA AGACAGGTGT
ATTCTGTGTG GCCGTTGTAT TGAAGCCTGT CCCCAGAATG CTAAAAAAAC TGAACAATAT
CTTGATAAAT TTAAAAACTA TATAGCCTCC GGTAATAAAG TAGTTGTTAG CCTGGCTCCC
TCGTATCTGG CTTCAGGTTA TTTCTCTACC CCCTGGAAGT TGGTAGGGGC TTTAAAAGAA
CTTGGTGTAG ATGTTGTTGA AGAAACAGCG ATTGGGGCAG AAGTTATCGC CGATGAGTAC
AGAGATTTAC TCAATAAAAA GGAACTAATT ATATCCAGCT GTTGCCCAAC TGTTGTAAAC
CTGGTTGAAA AATATTTTCC AGGATTATGT GATTATCTGG CACCTGTTAT ATCACCGATG
ATAGCCCACG GAAGACTGAT AAAACAGGAA ATGGGTGAAA ACTGCCGGGT TGTATTTATC
GGCCCCTGTT ATGCGAAAAA AGAAGAAGCG TTGACCCGGG GTGAAGGGTC AATTGATGCT
GTTTTGACCT TTGAGGAAAT ATTTAATTAC TTAGATAGAC TAAATCAGGA TATACCTCCC
CGTAATATTT TTCCTGACAG AACCTCTAAC AGGGCCCGCC GTTTTCCACT TCCCGGCGGG
GCCCTTAGAA CAGGTGGGCT AAATGAATTA AATATAAAGC CAGATGATAT TGTGTCAATA
TCAGGACTTG AAGATTGTAT GGAAACCTTC CGTGATATTG AAAAAGGTCT TATCAAGCCC
AGATTTATCG AGGCAATGGC CTGCCGGGGG GGTTGCCTCG GGGGGCCAGC CATGGGTGAA
GATGCTGGAA TCCTGGCCAG GAAACAAAGG TTATACAATA ATTTAAACAG GGGACAGCAG
AGCTGTCGGG GGGCTAACAA TAAAGGTATT ATAGTTTCCT GGAGCTACAC TCCCAGAGAG
ATAGATTATA AAGTTCCAGA TGAAGAAGAA ATAAAGAGAA TTCTGGCATT GACCGGTAAA
ACATCACCTG AAGATGAAAC AAACTGTGGT GGCTGTGGTT ATCCCAGTTG CCGGGATAAG
GCAATTGCTG TGTATAATGG TCTGGCCAAT CCGGAAATGT GTATTCCCTA TATGAGGGAA
AAGGCTGAAT CCTTATCCCA TGCTGTTGTT GATAGTACTC TTAATGGAAT TATTATTGTT
GATAAAGATA TGATTATTCA GGATTTTAAT CCGGCTGCAA ACCGGATGTT TAACCGCAGA
GATATTAAGG CTAAAGGTAA ACCATTGAGC ACTTTTATTG ATCCCGGGGA TTACATTGAT
GTCTGGGAGA ATCAGGAGAT GATAACTGAT AATTGTAAGC AATATCCCCA GTATGAGTTG
ATTACCAGGG AAACTATTTA TCCCCTCCCT AAATATGGAG TTGTCATCGG TATAATTACA
GATGTTACTG AAGAGGAAAA GACCAGGGCC GAAATTGATA ATATGAGACA GGAAGCTTTA
GACAGGGCCT CTCAGGTAAT TAAAGAACAG ATGCGGGTTG CCCAGGAAAT TGCAGGACTT
CTTGGTGAGA GTACGGCAGA TACTAAAGCA ACACTACTCG AACTAAAAGA GATTATAGGG
CAAAGAGAGG CGAAGACAAA TGGGGATGAA AGTTGA
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| Protein sequence | MGLVITSEAK CRDCYKCIRY CPVKAIGIKD GQAWVDEDRC ILCGRCIEAC PQNAKKTEQY
LDKFKNYIAS GNKVVVSLAP SYLASGYFST PWKLVGALKE LGVDVVEETA IGAEVIADEY
RDLLNKKELI ISSCCPTVVN LVEKYFPGLC DYLAPVISPM IAHGRLIKQE MGENCRVVFI
GPCYAKKEEA LTRGEGSIDA VLTFEEIFNY LDRLNQDIPP RNIFPDRTSN RARRFPLPGG
ALRTGGLNEL NIKPDDIVSI SGLEDCMETF RDIEKGLIKP RFIEAMACRG GCLGGPAMGE
DAGILARKQR LYNNLNRGQQ SCRGANNKGI IVSWSYTPRE IDYKVPDEEE IKRILALTGK
TSPEDETNCG GCGYPSCRDK AIAVYNGLAN PEMCIPYMRE KAESLSHAVV DSTLNGIIIV
DKDMIIQDFN PAANRMFNRR DIKAKGKPLS TFIDPGDYID VWENQEMITD NCKQYPQYEL
ITRETIYPLP KYGVVIGIIT DVTEEEKTRA EIDNMRQEAL DRASQVIKEQ MRVAQEIAGL
LGESTADTKA TLLELKEIIG QREAKTNGDE S
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