| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_02010 |
|---|
| Symbol | |
|---|
| ID | 7312520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 206110 |
|---|
| End bp | 207753 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643610624 |
|---|
| Product | chaperonin GroEL |
|---|
| Protein accession | YP_002507958 |
|---|
| Protein GI | 220931050 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
|---|
| TIGRFAM ID | [TIGR02348] chaperonin GroL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.000193134 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAG AATTAAAATT TAGTGAAGAT GCTCGCCGTG CTCTGGAACG CGGTGTTGAT
ACTCTGGCAA ATGCTGTTAA AGTAACTTTA GGTCCAAAAG GACGAAATGT AGTTCTTGAA
AAGAGCTTTG GAGCTCCTAC TATCACCAAC GATGGTGTTA GTATTGCCCG TGAAATAGAA
CTTGAAAATC ACTACGAAAA CATGGGGGCT CAGACTGTAA AAGAGGTTGC TACCAAAACC
AATGATGTTG CCGGTGATGG TACAACCACT GCTACAGTAC TGGCTCAGGC TATTTTCAAG
GAAGGTTTAA AGAATGTGGC CGCCGGTGCC AACCCCATGA TCCTGAAAAG GGGTATTGAA
AAGGCCGTTC AGAAGCTGGT AGAAGAGATT AAGGAACTAA GCAAACCTGT TGAAGGAAAA
GAAGCAGTTT CCCAGGTTGC TGCTATTTCT GCCGGTAATG ATGAAGAAGT CGGTAAGCTT
ATTGCTGAAG CTATGGAGAA AGTTGGTCAG GATGGAGTTA TCTCTGTTGA AGAATCCAAG
AGTATGGGGA CTTCTTTAGA TGTAGTTGAA GGTATGCAGT TCGATAGAGG ATATCTCTCC
CCCTATATGG TAACCGATAC TGATGCTATG GAAGCTTCCC TTGAAGATCC CTATATCCTG
ATCACTGACA AGAAGATATC TAATATCCAG GAAATCTTAC CCCTGTTAGA AAAAGTAGCC
CAGAGTGGTA AACCTCTCTT AATAATTGCT GAAGATGTTG AAGGGGAAGC CCTGGCTACT
CTTGTTGTCA ACAAGATTCG TGGTACCTTT AACTGTGTTG CTGTTAAAGC ACCTGGCTTT
GGTGATCGTC GTAAGGCTAT GTTAGAAGAC ATTGCTATTC TGACCGGTGG TCAGGTAATC
ACTGAAGACC TGGGTCTCAA GCTCGAAAAT GCTGATATTA GTATGCTTGG TCGGGCCCAC
AAAGTAACAG TAACCAAAGA GGATACTACT ATTGTAGAAG GTGCTGGAGA TAGCAAAGAA
ATTCAGAATA GAATTAAGCA GATCAGGACT CAAATTGAAA ATACTGATTC TGATTTTGAC
AGGGAAAAAC TGCAGGAAAG ACTGGCTAAA CTGGCCGGTG GTGTGGCTGT AATTAAGGTT
GGTGCTGCTA CTGAAACTGA ATTAAAAGAA AAGAAACACC GTATTGAAGA TGCTCTCTCT
GCTACCAGGG CCGCTGTAGA AGAAGGACTG GTAGCCGGTG GTGGAACCAC CCTTATTGAT
GCCATTCCTG CCCTTGATGA ACTGAACCTT GAAGGTGACG AAGCTACCGG TGTTGACATT
GTTAGAAAAG CACTTGAAGC CCCGGTACGT CTCATAGCAG ACAATGCCGG TTATGAAGGT
TCAGTAATTG TTGAGAAGGT TAAGTCTGAA GATAAAGGTA TCGGTTTCGA TGCCTATAAC
GGTGAGTTTG TAAATATGAT TGAATCCGGT ATTGTAGACC CGGCTAAGGT AACCCGTTCT
GCCCTTCAGA ATGCTGCCAG TGCTGCTGCT ATGTTGCTGA CTACTGAATG CCTGGTGGCT
GATAAAGAAG AGGATAATGA CAGTAATGGT AATGCCGGAA TGCCCGGTGG CGGTATGCCC
GGCGGAATGG GTGGCATGAT GTAA
|
|---|
| Protein sequence | MAKELKFSED ARRALERGVD TLANAVKVTL GPKGRNVVLE KSFGAPTITN DGVSIAREIE
LENHYENMGA QTVKEVATKT NDVAGDGTTT ATVLAQAIFK EGLKNVAAGA NPMILKRGIE
KAVQKLVEEI KELSKPVEGK EAVSQVAAIS AGNDEEVGKL IAEAMEKVGQ DGVISVEESK
SMGTSLDVVE GMQFDRGYLS PYMVTDTDAM EASLEDPYIL ITDKKISNIQ EILPLLEKVA
QSGKPLLIIA EDVEGEALAT LVVNKIRGTF NCVAVKAPGF GDRRKAMLED IAILTGGQVI
TEDLGLKLEN ADISMLGRAH KVTVTKEDTT IVEGAGDSKE IQNRIKQIRT QIENTDSDFD
REKLQERLAK LAGGVAVIKV GAATETELKE KKHRIEDALS ATRAAVEEGL VAGGGTTLID
AIPALDELNL EGDEATGVDI VRKALEAPVR LIADNAGYEG SVIVEKVKSE DKGIGFDAYN
GEFVNMIESG IVDPAKVTRS ALQNAASAAA MLLTTECLVA DKEEDNDSNG NAGMPGGGMP
GGMGGMM
|
|---|
| |