| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_01770 |
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| Symbol | |
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| ID | 7313305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 182203 |
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| End bp | 183957 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643610600 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002507934 |
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| Protein GI | 220931026 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4624] Iron only hydrogenase large subunit, C-terminal domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGTTT TAAAAATTAA GGAGACGGAC TGTCAGGACT GTTATAAGTG TGTACGTTTT
TGCCCGGTTA AGGCTATCAA GATTAAGGAT GGGCATGCAT CAATCATAGG TGAACGGTGC
CTGGGTGATG GTGGCTGTGT TGAGATTTGC CCCCAGAAAG CAAAAGAAGT TAGACAGGAC
TGGCCTGTTG TTAAAGACTG GCTGGAAAAG GGAGAAGAGA TAATAGTAAG TCTGGCTCCT
TCTTATCTGG TTGCTTACCG GAATAAATCT CCTCAAAATT TGGTGAATAC ACTTTATTCC
CTGGGGTTTA AAAAGGTGGA AGAGACCGCT ATCTGGGCGG ATTATGTTGC CCGGGCTCAT
CAAGAATTAT TAACCATGGA TGAGAAAAAT AAAAATATAT TAAGGGAAAA AGGTATTTTT
AGAGTTAAGA AACCTGTTAT AACAAGTTCA TGTCCAGGGG TTGTTAAGCT AATAGATTAT
TATTACCCAC ATCTTAAGGA ACATTTGGCC CCGGTTCTGT CACCGATGAT GGCCCATGGA
AAATATCTAA AGGAACAGGC CCCTGAAAGG AAAGTAGTAT TTGTTGGACC CTGTGCGGCC
AAAAAAGAGG AAGCCACCAG GGCCGGGTAT ATTGATGCTG TTTTAACCTT TACTGAAATA
CAGGAACTTA TAAAATCAGA GGGAAATGAG GTAGAAGTAA AGCAAGATAT TACCCCGGAA
CTTGCCACTG AAAAGGGAGC TTTTTTTCCT GCCTCCGGTG GTTTTTATAA AACAGCAGGC
CTTAAAGTAA CTGAAATTGA TAATAAATTT TTAACAGTTA CTGGCATAGA GAAACTTCAA
GAGCTGTTTT CATCCTTTGA AAAGGTTCAG AACCTGGAAT TGATTGAAGC AATGGCCTGT
GAAGGTGGCT GTCTGGCCGG GGCTTTTTTT CCGGATTCAG CCAGTCTGTG GGAAAGGCGC
CAGAAATTAC TGGAGAGGAT AGAACAGCAA GAGAGAAAAA AAATAGTTGG AGAACAGAAT
CTGGAACAAA ATGTGAAATT AACTTTTATG AATCTTAACC TTGATAATAA AACTAATGAT
CCTGAAGAAC CAGATGAAGA GGATATTAAA AAAATACTTG CTAAAACCGG GAAATATACA
GAACAAGATG AATTAAATTG TGGTGCCTGT GGATATAATA CCTGTCGTGA AAAAGCCCGG
GCCGTATATT ATGGCTGGGC AGAATTAGAG ATGTGCTTAC CCTATATGCG CCAGCGGGCT
GAATCACTGG CCAACAAGTT TCTGGAGTCA GTTCCCAATG GTGTTGTCGT TATCGATTCT
ACATTTACCA TTCAGGAGGT AAATCCGACA ATCCTTGAAA TGTTTAACCG GGAAGGAGTT
AACCTTATCG GAAAAACTCT GGATGAATTG CTTACAGATA TATCTCATTT TGCTGAAGTT
ATGGAAACCC AAATCCAGAA AGAAGGGAAA ATTAAGCATG GTGACAGGGT TTTTGAAGAG
CTTATCTTTC CAATTGAAGA TGAGGACTTA ATTGTAGGTA TTTTCAGTGA TATAACAGAG
ATGGAAAAAC AGAGAAAAGA CCTTAAGGAT CTGAAACAGG AAACCCTGTT AAATGCTCGG
AAAGTTATAG ATAAACAGAT GAGGGTAGCC CAGGAGATTG CCGGGCTTTT AGGTGAAACT
ACAGCCGAAA CCAAGGTAAC CCTGTCCCGA CTGATTGATA TTATCAGTGG GGAGGAAGAA
AAAAATGATG GTTGA
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| Protein sequence | MTVLKIKETD CQDCYKCVRF CPVKAIKIKD GHASIIGERC LGDGGCVEIC PQKAKEVRQD
WPVVKDWLEK GEEIIVSLAP SYLVAYRNKS PQNLVNTLYS LGFKKVEETA IWADYVARAH
QELLTMDEKN KNILREKGIF RVKKPVITSS CPGVVKLIDY YYPHLKEHLA PVLSPMMAHG
KYLKEQAPER KVVFVGPCAA KKEEATRAGY IDAVLTFTEI QELIKSEGNE VEVKQDITPE
LATEKGAFFP ASGGFYKTAG LKVTEIDNKF LTVTGIEKLQ ELFSSFEKVQ NLELIEAMAC
EGGCLAGAFF PDSASLWERR QKLLERIEQQ ERKKIVGEQN LEQNVKLTFM NLNLDNKTND
PEEPDEEDIK KILAKTGKYT EQDELNCGAC GYNTCREKAR AVYYGWAELE MCLPYMRQRA
ESLANKFLES VPNGVVVIDS TFTIQEVNPT ILEMFNREGV NLIGKTLDEL LTDISHFAEV
METQIQKEGK IKHGDRVFEE LIFPIEDEDL IVGIFSDITE MEKQRKDLKD LKQETLLNAR
KVIDKQMRVA QEIAGLLGET TAETKVTLSR LIDIISGEEE KNDG
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