| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_01500 |
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| Symbol | |
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| ID | 7313277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 154116 |
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| End bp | 154856 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643610572 |
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| Product | pseudouridylate synthase I |
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| Protein accession | YP_002507906 |
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| Protein GI | 220930998 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 8.6087e-16 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGCGAA ATATTAAGAT AACCGTAGAA TATGATGGAA CCAACTATAG TGGCTGGCAA
ATCCAGAATA ATACCCCGGA GACAATACAG GGAGTATTAA GTAAATGTCT TTTTGATATA
AATAAGTCGC CAGTTAAATT GATAGGGGCC AGCCGGACAG ATGCCGGGGT TCATGCCCGG
GGCCAGGTGG CCAATTTCAG GCTTAAAGTG GGAATCCCGG TAGAAAGAAT TCCCCTTGCT
TTAAACAGTA AACTACCACC TGATATAGTA TGTAAAGATG CTGAGGAAGT AACTGAAGAT
TTTCATGCTC GTTTTGATGC CAGGGGGAAA AGATATATCT ATCGAATTCT TAATAGTGAA
TATCCATCTC CTTTCTTACG TAATTATACC TATTTTATCC CCCATAATCT AAATATAGAT
AAAATGAGAG AGGCAGGTTC GCTTTTAATT GGAGAACATG ATTTTGCCTC TTTTCAGGCA
TCCGGTGGAT CCAATAAAAC CACTGTGAGG ACAATAACAA AATTAGATAT ATATCGTGAC
CAGTATCAAA TAAAAATAGA AGTATGTGGT AATGGTTTTT TATATAAAAT GGTCAGGATA
ATAGCAGGTA CTTTGATTGA AGTCGGGTTA GGGAAAAGAA CTGTAAAGAG TGTTGGTCAG
CTATTGGAGA TAAAGGATAG AGATAGAGCA GGTTTTACTG CACCACCCCG GGGGTTAACC
CTTATTGAAG TATTTTATTA A
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| Protein sequence | MERNIKITVE YDGTNYSGWQ IQNNTPETIQ GVLSKCLFDI NKSPVKLIGA SRTDAGVHAR
GQVANFRLKV GIPVERIPLA LNSKLPPDIV CKDAEEVTED FHARFDARGK RYIYRILNSE
YPSPFLRNYT YFIPHNLNID KMREAGSLLI GEHDFASFQA SGGSNKTTVR TITKLDIYRD
QYQIKIEVCG NGFLYKMVRI IAGTLIEVGL GKRTVKSVGQ LLEIKDRDRA GFTAPPRGLT
LIEVFY
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