Gene Hore_01240 details

Gene Information

• Locus tag: Hore_01240
• Symbol: rplP
• ID: 7313251
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothermothrix orenii H 168
• Kingdom: Bacteria
• Replicon accession: NC_011899
• Strand: +
• Start bp: 140479
• End bp: 140913
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 643610546
• Product: 50S ribosomal protein L16
• Protein accession: YP_002507880
• Protein GI: 220930972
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0197] Ribosomal protein L16/L10E
• TIGRFAM ID: [TIGR01164] ribosomal protein L16, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 39
• Plasmid unclonability p-value: 0.844455
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAATAC CAAAAAGGGT TAAATACCGC AAACAGCATC GTGGACGTAT GACCGGAAAG 
GCCAAGCGTG GTAATAGAAT AACATTTGGA GAATACGGAT TACAGGCATT AGAACCAGCC 
TGGATTACCA ATAGACAGAT AGAGGCTGCC CGTGTTGCCA TTACCAGGAG TTTAAAGAGA 
GGCGGGAAGG TCTGGATTAA AATCTTCCCT GATAAACCGG TAACTGCTAA ACCAGCTGAA 
ACCCGTATGG GTGGAGGTAA AGGAGCCCCC GAAAAATGGG TAGCTGTAGT TAAACCCGGA 
AGAATTATGT TTGAAGTAGC CGGGGTTAGT GAGGAACTGG CCAGAGAGGC TATCAGGCTA 
GCTTCTCATA AACTACCAAT AAAAACAAGA TTCGTCAAGA GGGAAGAAAT GGATGGTGAG 
GCCAATGAGA GCTGA 

 

Protein sequence

MLIPKRVKYR KQHRGRMTGK AKRGNRITFG EYGLQALEPA WITNRQIEAA RVAITRSLKR 
GGKVWIKIFP DKPVTAKPAE TRMGGGKGAP EKWVAVVKPG RIMFEVAGVS EELAREAIRL 
ASHKLPIKTR FVKREEMDGE ANES