Gene Hore_01180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_01180 
Symbol 
ID7313245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp137328 
End bp137957 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content41% 
IMG OID643610540 
Productribosomal protein L4/L1e 
Protein accessionYP_002507874 
Protein GI220930966 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.000715314 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCAGG TAGCTAAGTA TGATACAACC GGTAACCGGG TTGGTGATAT AGATTTAGCT 
GATAACGTTT TTAATGAAGA AGTTAATGAA CATGTTGTTC ACCAGGTTGT CACAGCTCAG 
CTGGCAACTA TGCGTAGAGG TACAGCTTCT ACCAAAACCA GAGGTGAAGT CAGCGGAGGT 
GGACGAAAAC CCTGGAGGCA GAAGGGAACC GGTCGGGCCA GACATGGAAG TATTCGGTCA 
CCCTTATGGG TTGGTGGTGG AATTGTTTTC GGTCCAAGAC CACGCAAGCA TATCAAAAAG 
GTTCCCAAAA AGGTTAAAAA ATTGGCTTTG AGGTCAATTT TAAGTTATAA ATCACAGAAT 
GAAGAATTGA TTATCCTTGA TGAATTGAAA TTTGATACCC CAAAAACCAA ACAGGTGGTA 
GAATTATTAT CAAATCTGAA TCTGGAAGGT AAAAAAGTGT TAATCATTTT ACCTGATAAG 
GATGCTAACA TTTACCTCTC AGCCCGTAAT ATTCCAGGAG TAAAGACTCT GGTTGTAGAT 
GCCCTTAATG CATTCGACCT TCTTAACAAT GATTGTATTG TTATGTCTGA AGAGGCTGTT 
AAAAGGGTAG AGGAGGTGTT AGCCAGATGA
 
Protein sequence
MPQVAKYDTT GNRVGDIDLA DNVFNEEVNE HVVHQVVTAQ LATMRRGTAS TKTRGEVSGG 
GRKPWRQKGT GRARHGSIRS PLWVGGGIVF GPRPRKHIKK VPKKVKKLAL RSILSYKSQN 
EELIILDELK FDTPKTKQVV ELLSNLNLEG KKVLIILPDK DANIYLSARN IPGVKTLVVD 
ALNAFDLLNN DCIVMSEEAV KRVEEVLAR