Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_00990 |
Symbol | |
ID | 7314321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 117621 |
End bp | 118355 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643610521 |
Product | RNA methyltransferase |
Protein accession | YP_002507855 |
Protein GI | 220930947 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00000000314375 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCCAGA TTGAAGGCCG CAATCCAGTT ATTGAAGCTA TTAAAAGCGG GAGAACTATT AAAAAAATAT TTATACAGGA AGGGGTCAGG GGTAAGAAAG TAGACAGGAT AATAAAAGAA GCCAGCAGGT TTAATATTCC ACTTCAAAAA GCCAAAAAGG ATTTTCTGGA TAAAAAGGCC AGGTCCCATT CCCATCAGGG TATTATAGCC ATGGCTGATG ATATTAAATA TGTATCTCCC CGTGAAATGG TTGAAATTGC CAGGGAAAAA GGAGAAGATC CCTTTATTAT AATACTTGAT CAGGTACAGG ATCCCCACAA TCTCGGTGCT ATAATTAGAA CAGCTTATGC AGCAGGAGCC CATGGGCTGA TTTATCCCCG GAAAAGGTCA GCCGACATTA CCCCGGTTGT GACCAAAGCC TCGGCCGGAG CTGTTAATCA CCTGCCTCTG GCTAAAGTCT CCAATATAAA CTATACCATT GCTGACTTGA AAGATATGGG TCTATGGATA ACGGGGACCG ATGTCAGGGG GACCAGACCT TATTATTCTG CAGATTATAA AGGTCCAGTC GGACTTGTAA TTGGAAACGA AGGTAAGGGG ATGCGTCGTC TGGTAAAAGA AAATTGTGAC TTTGTGGTTA ATATCCCCAT GAGTGGTGAA CTGGGGTCCC TCAACGCTTC AGTGGCAGCA GGGGTAGTTA TTTTTGAGGT TGTCCGACAA CGGCGCTCAA CTTAA
|
Protein sequence | MAQIEGRNPV IEAIKSGRTI KKIFIQEGVR GKKVDRIIKE ASRFNIPLQK AKKDFLDKKA RSHSHQGIIA MADDIKYVSP REMVEIAREK GEDPFIIILD QVQDPHNLGA IIRTAYAAGA HGLIYPRKRS ADITPVVTKA SAGAVNHLPL AKVSNINYTI ADLKDMGLWI TGTDVRGTRP YYSADYKGPV GLVIGNEGKG MRRLVKENCD FVVNIPMSGE LGSLNASVAA GVVIFEVVRQ RRST
|
| |