Gene Hore_00980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_00980 
Symbol 
ID7314320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp116918 
End bp117604 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content41% 
IMG OID643610520 
Productthymidylate synthase, flavin-dependent 
Protein accessionYP_002507854 
Protein GI220930946 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1351] Predicted alternative thymidylate synthase 
TIGRFAM ID[TIGR02170] thymidylate synthase, flavin-dependent 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.21907e-09 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGTAA GACCTGAAGC AAAATTAATT GATTATACCC CCGATCCGGA AAAAAATGTC 
GCTATTTCGG CCAGATTGTG TTATTCAAAA AAAGGACCGG AGCAGTTAAT GGAAGAGATG
AGTAGAGAGG AAATAGAAAA ACTGGTAAGA AAGGTTGTCA GTATGGGGCA TCTATCAACC
CTGGAGCATA CCTATTTTTA TTTTCATATC CAGTGTAGCC GGGTAACCAG TCATCAGCTG
GTAAGACAGA GAATCGGGGT TTCTTATAGC CAGCGTTCTC AGCGCTATGT TTCGGAGGAG
GATTTTGATT ATATTATTCC CCCCTCTATT CAGAAAAATA GTGAGGCCCT GAAGGCTTTC
AGGGAATATA TGGAAATATC TAAAGAGGCT TATAAATCAC TCCTCGATAA GGGTATTCCC
AAGGAAGATG CCCGTTTTCT TTTACCGGCT GTTAAGACCA ATCTGGTTGT GTCCTATAAT
GCCCGTTCCT TAATGCATTT TTTCAGGTTA AGATGTTGTA ACCGGGCCCA GTGGGAGATA
AGAAGTATTG CCAATCAGAT GCTTTTTCAG GTGAGGAAAG TAGCCCCTGT TTTATTTGAA
AAGGCAGGAC CTACCTGTGA GGTAGAAGGT TACTGTCCTG AAGGGGAATT TTCCTGTGGC
CGTATTGATA ATATAAAAAC ATCATAA
 
Protein sequence
MEVRPEAKLI DYTPDPEKNV AISARLCYSK KGPEQLMEEM SREEIEKLVR KVVSMGHLST 
LEHTYFYFHI QCSRVTSHQL VRQRIGVSYS QRSQRYVSEE DFDYIIPPSI QKNSEALKAF
REYMEISKEA YKSLLDKGIP KEDARFLLPA VKTNLVVSYN ARSLMHFFRL RCCNRAQWEI
RSIANQMLFQ VRKVAPVLFE KAGPTCEVEG YCPEGEFSCG RIDNIKTS