Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_00980 |
Symbol | |
ID | 7314320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 116918 |
End bp | 117604 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643610520 |
Product | thymidylate synthase, flavin-dependent |
Protein accession | YP_002507854 |
Protein GI | 220930946 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1351] Predicted alternative thymidylate synthase |
TIGRFAM ID | [TIGR02170] thymidylate synthase, flavin-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00000000221907 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGTAA GACCTGAAGC AAAATTAATT GATTATACCC CCGATCCGGA AAAAAATGTC GCTATTTCGG CCAGATTGTG TTATTCAAAA AAAGGACCGG AGCAGTTAAT GGAAGAGATG AGTAGAGAGG AAATAGAAAA ACTGGTAAGA AAGGTTGTCA GTATGGGGCA TCTATCAACC CTGGAGCATA CCTATTTTTA TTTTCATATC CAGTGTAGCC GGGTAACCAG TCATCAGCTG GTAAGACAGA GAATCGGGGT TTCTTATAGC CAGCGTTCTC AGCGCTATGT TTCGGAGGAG GATTTTGATT ATATTATTCC CCCCTCTATT CAGAAAAATA GTGAGGCCCT GAAGGCTTTC AGGGAATATA TGGAAATATC TAAAGAGGCT TATAAATCAC TCCTCGATAA GGGTATTCCC AAGGAAGATG CCCGTTTTCT TTTACCGGCT GTTAAGACCA ATCTGGTTGT GTCCTATAAT GCCCGTTCCT TAATGCATTT TTTCAGGTTA AGATGTTGTA ACCGGGCCCA GTGGGAGATA AGAAGTATTG CCAATCAGAT GCTTTTTCAG GTGAGGAAAG TAGCCCCTGT TTTATTTGAA AAGGCAGGAC CTACCTGTGA GGTAGAAGGT TACTGTCCTG AAGGGGAATT TTCCTGTGGC CGTATTGATA ATATAAAAAC ATCATAA
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Protein sequence | MEVRPEAKLI DYTPDPEKNV AISARLCYSK KGPEQLMEEM SREEIEKLVR KVVSMGHLST LEHTYFYFHI QCSRVTSHQL VRQRIGVSYS QRSQRYVSEE DFDYIIPPSI QKNSEALKAF REYMEISKEA YKSLLDKGIP KEDARFLLPA VKTNLVVSYN ARSLMHFFRL RCCNRAQWEI RSIANQMLFQ VRKVAPVLFE KAGPTCEVEG YCPEGEFSCG RIDNIKTS
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