| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_00510 |
|---|
| Symbol | |
|---|
| ID | 7314268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 56965 |
|---|
| End bp | 59133 |
|---|
| Gene Length | 2169 bp |
|---|
| Protein Length | 722 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643610468 |
|---|
| Product | RNA binding S1 domain protein |
|---|
| Protein accession | YP_002507807 |
|---|
| Protein GI | 220930899 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2183] Transcriptional accessory protein |
|---|
| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000000209068 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAAA GAATAATTGG ACAAATCTCT AAAGAATTAA AACTGAAAAC TAACCAGGTA
AAAGGAACGG TTAAACTTCT TGATGAAGGT AATACCGTTC CTTTTATTGC GCGTTACCGT
AAAGAAGTGA CTGGAGGACT TGATGAAGCA CAGATAAGGA CTATTGAAGA AAGACTGGAA
TACCTCCGCA GTCTTCAAAA GCGGAAGGAA GAAGTTATAA GGCTGATTGA AGAGCAGGGA
AAGTTAACTC CGGAACTTGA AGAAAAGATT AAAAAAGCTT CCATTTTACA GGAAGTAGAA
GATCTCTACA GGCCTTATAA GCAGAAGCGG CGGACCCGGG CTACCAGGGC CAAAGAAAAA
GGCCTTGAAC CCCTGGCTAA GTTAATGTGG ACACAAGAAC TTACTTCTGG TAATCCTGAA
GATATAGGTA AGGAATATAT CAACCCCGAA GTTGAACTGG AGAGCATTGA AGATGTTTAT
CAGGGAGCCA GGGATATTAT AGCAGAATGG GTTTCAGATG ATGCCGGAAT TAGAAAAGAA
ATCAGGAAAA TAACCTTTAA GCAGGGAGTT ATTCAGAGCA CCTGTAAAGA TAGTGAGACC
GATGATGAAG GCAAATATGA GATGTATTAT GATTACAGGG AACCTGTCAG TAAAATACCA
CCCCACCGGG TTCTGGCTAT TAACCGGGGG GAGAAAGATG AAGTGCTCCA GGTTAAGGTT
TTAGCTCCTG AAGAAGATAT TATAGAATTA ATCAAGGATA GGGTGGTTAA CAATCCTGAA
AGTATATTTT ACAATGATAT AATTGAAGCT ATTAAAGATG GATATAAAAG GTTAATTGCT
CCTTCCATTG AAAGGGAGGT TAGAAATAGT CTTACTGAAA AAGCAGAAGA GCATGCCATA
AATATTTTTT CTAAAAACCT TCGCAATCTG CTTTTGCAGC CACCACTCAG AGGTCATACT
GTTATGGGAA TTGACCCTGC CTATAGAACG GGTTGTAAAG TCTGTGTTGT GGACCCGACC
GGGAGGTTAC TGGATACAGC AACTATTTAC CCCCATCCGC CCCAGAGCCG GACAGGTGAA
GCTAAAAAGG TTGTTAAAGG TTTGATAAAT GAATACCAGG TTACTACGAT TGCTATCGGG
AATGGGACAG CATCCCGGGA AACCGAGTTT ATGGTTGCTG ATATAATTAA GGAACTTAAA
AACACTCAGG TTAACTATGT AATAGTAAAT GAAGCCGGGG CTTCAGTTTA TTCTGCATCC
AAACTGGCCA GAAAAGAGTT TCCTGAACTC GATGTAGCCA TGAGAGGAGC CATTTCCATT
GCGAGGCGGT TACAGGACCC CCTGGCTGAG CTTGTTAAAA TAGATCCCAA ATCCATTGGG
GTTGGTCTTT ATCAGCATGA TGTTAATCAA AAAAACCTTG AAAAATCCCT CGGTAATGTA
GTGGAATCGG CCGTTAATTA TGTTGGAGTT GATTTAAATA CAGCTTCGCC ATCCCTTTTA
AAATATGTGG CCGGTATTAA TAGCCGGGTG GCGTCAAATA TTGTTAAATA CCGTGAGGAA
AATGGTAAAT TTGAAACCAG GGATGAATTA TTAAAGGTGA AGGGTCTGGG TAAAAAAACA
TTTACCCAGG CAGCTGGTTT TTTAAGAATA CCGGATGGAA CAAATCCCCT GGATAATACC
CCAATCCATC CTGAATCCTA TCAGGCCGCT AAAGGTCTAT TACAGGATGT CGGGTTTAAA
CTGTTAGATA TTACTGATAA GGAAAAGCTT AAGGAAGTGC GTGAAGAGCT GGACTCCATC
AATATAAAAT CCAGGGCTGA AAAACTGGAG ACAGGAATAC CAACTTTAAA AGATATTGTA
GATGCTTTAA AAAAACCGGG ACGCGACCCG CGTGATGAAT TACCTAAACC TATCTTCAGG
TCTGATGTAT TGAAAATGGA AGATTTAGAG GCTGGCATGC TCCTTCAGGG TACGGTCCGG
AATGTAGTGG ATTTTGGTGC TTTTGTTGAT ATTGGGGTCA AGGTGGACGG GCTTGTTCAT
ATTTCTGAAA TGAGTCATGA TTATGTAGAT GATCCCCTCA AGGTGGTACA GGTAGGGGAT
ACTGTAAAGG TTAAAATATT AGAGGTAGAT GAGAGGCGAA ACAGGATTTC CCTGAGTATG
AAGTTGTAG
|
|---|
| Protein sequence | MNQRIIGQIS KELKLKTNQV KGTVKLLDEG NTVPFIARYR KEVTGGLDEA QIRTIEERLE
YLRSLQKRKE EVIRLIEEQG KLTPELEEKI KKASILQEVE DLYRPYKQKR RTRATRAKEK
GLEPLAKLMW TQELTSGNPE DIGKEYINPE VELESIEDVY QGARDIIAEW VSDDAGIRKE
IRKITFKQGV IQSTCKDSET DDEGKYEMYY DYREPVSKIP PHRVLAINRG EKDEVLQVKV
LAPEEDIIEL IKDRVVNNPE SIFYNDIIEA IKDGYKRLIA PSIEREVRNS LTEKAEEHAI
NIFSKNLRNL LLQPPLRGHT VMGIDPAYRT GCKVCVVDPT GRLLDTATIY PHPPQSRTGE
AKKVVKGLIN EYQVTTIAIG NGTASRETEF MVADIIKELK NTQVNYVIVN EAGASVYSAS
KLARKEFPEL DVAMRGAISI ARRLQDPLAE LVKIDPKSIG VGLYQHDVNQ KNLEKSLGNV
VESAVNYVGV DLNTASPSLL KYVAGINSRV ASNIVKYREE NGKFETRDEL LKVKGLGKKT
FTQAAGFLRI PDGTNPLDNT PIHPESYQAA KGLLQDVGFK LLDITDKEKL KEVREELDSI
NIKSRAEKLE TGIPTLKDIV DALKKPGRDP RDELPKPIFR SDVLKMEDLE AGMLLQGTVR
NVVDFGAFVD IGVKVDGLVH ISEMSHDYVD DPLKVVQVGD TVKVKILEVD ERRNRISLSM
KL
|
|---|
| |