Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_00380 |
Symbol | |
ID | 7314255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 42408 |
End bp | 43676 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643610455 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_002507794 |
Protein GI | 220930886 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAATA AATCTTTAAT TGTTTTACTG GTAGTAAGCC TGTTACTGGT TTGTTATGGG ACAGGATTGG CTAAAACCAC TGTCAGGATT GCTGGCTTTG GGGGGAATGA CCAGGTAATT GTTGAGGAGC TCCTTAATAA ATTTGTCAGG CCAGAGCTGG CGGATGAAGG TATTGAAATT ATTTACGAGC CTATTGCTGA TGATTATCAA AGGTACCTTT TGAATTCGCT TTCTGCCGGT ACTGCTGCAG ACCTGTTTTA TATGGATATT TTCTGGGCTA AAAATGTTAT AAAAGAAGGT CTGGTTGAAC CGCTTGATAG CTATCTGGCT AAATCTGAAG TTATCAGCAA AGAAGACATT GTGCCCAGCT TACTAGAAGG TTTTACCTAT GAAGGCAAAT TGTATGGAAT CCCCAAGGAT TTCAACTCTC TGGCCCTGTT TTACAATAAG GACCTTTTTG ATATAGCAGG AATACCTTAT CCCAATGAGG CCGATACCTG GAAAACCTTA GAATATAAAT TAAGGAAAGT GGTTGAGTTT TTTGAAAAAG AAGGAGAAGA AATTCATGGA TTGGCATTAC AACCTGAGTA TGCCAGGATG GGTGCCTTTG CTTATGCTGC TGGATGGGAA CCTTTTGTAA ATGGAAAAAC AAATCTCCAG GACCCCAAAT TTGTCAAAGC ATTTAAATGG TATACCGGAT TAAAAGAAAA AGGGTTAGGT ATTATGCCGG CTGATATTGG CCAGGGCTGG GGCGGTGGCG CCTTTGCTAA TGGTAATTTT GCTGCCTGCC TCGAAGGAGC CTGGATTATT GGATTCCTGC GTGATCAGGC ACCAAACCTG AATTATGGTG CTACCTTGCT ACCGAAATGC TCAGATACCG ATGAAAGAGG TAACTTTATC TTCACTGTTG CCTGGGGTAT AAATGCTAAC TCAAAGAATA AAGAAGCCGC TTTCAGGGTT TTAGAAACAC TGACAAGTCC TGAAGCCCAG CAATGGGTTC TGGAAAGGGG TCTTGCCATT CCCAGCCGGA AATCACTGGC TGACAATCCG TACTTTGAAA AGCAGACCAA GGAAGCCCAG GCCAATAAAG TTGTCTTCAT GGGTGCGTCA AGAGGAAATA TTAAACCCTA TAGTTTCAGG GATTATGGTG GAGAATGGAT GGAACCAATC AATACTGCTT TAAATGAAGT AATGAGTGGA CAGTCAACAG TAGAAGAAGC ATTAAAAACT GCCCAGGAAA GACTTGAACA GGACATAATG AATAAATAA
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Protein sequence | MRNKSLIVLL VVSLLLVCYG TGLAKTTVRI AGFGGNDQVI VEELLNKFVR PELADEGIEI IYEPIADDYQ RYLLNSLSAG TAADLFYMDI FWAKNVIKEG LVEPLDSYLA KSEVISKEDI VPSLLEGFTY EGKLYGIPKD FNSLALFYNK DLFDIAGIPY PNEADTWKTL EYKLRKVVEF FEKEGEEIHG LALQPEYARM GAFAYAAGWE PFVNGKTNLQ DPKFVKAFKW YTGLKEKGLG IMPADIGQGW GGGAFANGNF AACLEGAWII GFLRDQAPNL NYGATLLPKC SDTDERGNFI FTVAWGINAN SKNKEAAFRV LETLTSPEAQ QWVLERGLAI PSRKSLADNP YFEKQTKEAQ ANKVVFMGAS RGNIKPYSFR DYGGEWMEPI NTALNEVMSG QSTVEEALKT AQERLEQDIM NK
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