Gene Hore_00180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_00180 
Symbol 
ID7314929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp26191 
End bp27204 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content37% 
IMG OID643610437 
Producttransport system permease protein 
Protein accessionYP_002507776 
Protein GI220930868 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00000507964 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTAA ATTATTCGAG AAAAATAATT TTCCTGGCTT TAATAGTATT ATTGATAGTA 
GTCTTTATAT TATCTTTAGC AGTCGGGTCG GTTCATATAC CCATTCATCA AATTTGGGCA 
ATTATACTGG ACCATGCAGA TAGTAATGAA ACCTATAAAA TAATTATAAA GGATATCAGG 
CTTCCCCGGA TTATTCTAAG TTTCCTGGTT GGTTCAGCTC TGGCTGTATC CGGGGTTGTG 
TTTCAGGGAG TTATCAGAAA TCCCATGGTT GATCCCTATA TAATTGGAGT TTCAGCCGGA 
GCTGGAACAG CTGTTACCCT GGCTATTTTA TTTAACTGGA GTATTACCTT TCTGTGGTTT 
GATACTATGC CAATTATGGC TTTTCTGGGG TCTTTATTGA CGATTTTTAC TGTATACAGG 
ATGGCACGGG TTAACAAAAA AACTCCGGTA ACTACTTTTT TACTGGCTGG TGTAGCGGTT 
GGCTTTCTGT TAAATGCAGT TATGTCTTTT TTGATGGTTT TTGTTACCGG TGATCTGTAT 
AAAGTTGTTT ACTGGTTAAT GGGGAGTTTG ATTACAGAAG GCTGGAAAGA AGTAAAGATA 
ATAGTTCCGT ATTATATACT GGGTTTAATA CCTGTCGTTT TTTATTTAAA AGATTTAAAC 
ATACTTTTAC TGGGTGAAGA GAGTGCCCAT AACCTGGGGG TTAATGTAGA AAGGGTTAAA 
TCAATTTTGA TTTTTTCAGG TGCTTTATTA ACCGCAGCAG CTGTATCTGT CAGTGGAATA 
ATAGGTTTTA TTGGATTAAT AGTTCCCCAT ATTTCAAGGC TTATTATTGG CCCTGACCAC 
CGGCGTTTGC TGCCTTTTTC ATGGCTTCTC GGAGGTTTAT TTCTGGTTGT AAGTGATGAT 
CTGGCCCGGA CATTAATTAA ACCATCGGAG ATACCGGTCG GTATTATTAC GGCCCTGGTA 
GGGGCTCCTT ATTTTATATA TCTTCTAAAG AAAAAGAAGG ATAATTTATG GTGA
 
Protein sequence
MKLNYSRKII FLALIVLLIV VFILSLAVGS VHIPIHQIWA IILDHADSNE TYKIIIKDIR 
LPRIILSFLV GSALAVSGVV FQGVIRNPMV DPYIIGVSAG AGTAVTLAIL FNWSITFLWF 
DTMPIMAFLG SLLTIFTVYR MARVNKKTPV TTFLLAGVAV GFLLNAVMSF LMVFVTGDLY 
KVVYWLMGSL ITEGWKEVKI IVPYYILGLI PVVFYLKDLN ILLLGEESAH NLGVNVERVK 
SILIFSGALL TAAAVSVSGI IGFIGLIVPH ISRLIIGPDH RRLLPFSWLL GGLFLVVSDD 
LARTLIKPSE IPVGIITALV GAPYFIYLLK KKKDNLW