Gene Hore_00110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_00110 
Symbol 
ID7314906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp12699 
End bp13796 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content40% 
IMG OID643610414 
Productspore germination protein 
Protein accessionYP_002507769 
Protein GI220930861 
COG category 
COG ID 
TIGRFAM ID[TIGR00912] spore germination protein (amino acid permease) 


Plasmid Coverage information

Num covering plasmid clones71 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAC ACGGTAAATT AAGTGAAAGG CAGTTTGCCG GGATCATTGC CAACACCATG 
GTCGGGGTCG GGGTATTAAT ATTACCTAAA ACGGCAACTA AATTTGCCGG TACAGCCGGC
TGGATTGCCC TTCTGCTGGG GGGAGTTATT GCCCTTTTTT TTCTGTTTCT TATCTTAAAA
CTGGGGACCC GCTTTCCGGA AAATACCTTA ATGGAGTATG CCCCTCGTAT TATCGGGAAA
ATACCGGGTA CCCTGGTTTC GCTCATCTTC TGTACTTACT GGTTTTTATT GAGTAGTTTA
ATATTCAGGG TTTTTGCAGA AATGATGGTT GATGCAATTT TATTAAATAC CCCCATTGAA
GTGATAATTA TCTCTATGTT AATTCTGGTA GCCTACCTCT CCAGGCATGA TGTAGAGGTC
TTCGGGAGGG TTAATGAATT GTTCTTTATC TTCCTAATAA TACCGGCTGT TTTTGGACTG
GCTGTTTCCC TTAAACAGGT GACCGGGATA AAACTTCTTC CGTTGCTGGG AAATGGACTT
CCCTCTATTT TAATTAACAC CAGGGAACTG TTTTTTTCCT TTGTTGGCTT TGAAATTATA
TTTCTGTTTA TCCCTTCTAT AACTACCCTG GGTAAAGTAT ATAACTATGG GTTTAAAGGA
TGGTTATCCC CTGCAGCAAT TTATCTGGCT GTAGTTATTA TTGGAATAGG AGTGTTTGGA
ACCAGGGAAC TTCAGAACTT AATGTGGCCG ACCCTGGAGC TGGTTAAGGT GATCAATTTC
CCAGGACTCA TTTTAGAAAG GGTTGAGGCT ATTTTTATTG CCTTCTGGGT AATAGCTGTT
TTTACCACGG TTACTAATTT ATTTTATAGT TCGGTGGTAG GGGCTACCCA GGTTTTAAAA
TTATCTGACC ATAAAACTCT GGTATACCCC CTACTTCCTT TGTTTTATTT TTTTAGTACC
TATCCCCAAA ATATATATGA AGTATTAAAT TATATGAATG TCATGGGGAA GTTTGGAGGG
TTAGTAATTA TAACCGTGAC TCCCCTGTTG TATATTATCT CTCTCATTAG AAATATTAAA
GGGGGACAGA AGGCATGA
 
Protein sequence
MKEHGKLSER QFAGIIANTM VGVGVLILPK TATKFAGTAG WIALLLGGVI ALFFLFLILK 
LGTRFPENTL MEYAPRIIGK IPGTLVSLIF CTYWFLLSSL IFRVFAEMMV DAILLNTPIE
VIIISMLILV AYLSRHDVEV FGRVNELFFI FLIIPAVFGL AVSLKQVTGI KLLPLLGNGL
PSILINTREL FFSFVGFEII FLFIPSITTL GKVYNYGFKG WLSPAAIYLA VVIIGIGVFG
TRELQNLMWP TLELVKVINF PGLILERVEA IFIAFWVIAV FTTVTNLFYS SVVGATQVLK
LSDHKTLVYP LLPLFYFFST YPQNIYEVLN YMNVMGKFGG LVIITVTPLL YIISLIRNIK
GGQKA