| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_00100 |
|---|
| Symbol | |
|---|
| ID | 7314905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 11120 |
|---|
| End bp | 12715 |
|---|
| Gene Length | 1596 bp |
|---|
| Protein Length | 531 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643610413 |
|---|
| Product | GerA spore germination protein |
|---|
| Protein accession | YP_002507768 |
|---|
| Protein GI | 220930860 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 70 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAACTGGG AGCGGATAAA AGAGAGAATA GATGAAATTA TCAGTAGTAA TACTGATAGA
CCCGGGGAAA AAACATCCAA AAAAAAATTA ACCAGGGATA TAAAGAAAAA TGAGAAAACC
ATAGAAGATA TAATTGGATT TAGTGATGAT GTCAATTTCA GGGAATTTAA GCTGGGAAAA
AAGCTTAAAA TTAAGGCAAC CCTTATCTAT ATTGATAGCC TGGTTGATAA AAAAACAATA
AATGAAAGTA TCCTCGAACC ATTATTTACT GAGGAGTTTT TCAGTGATAA TGTTGAGAAT
TTAACGACCG ATGATATTGT TAAATTTGTC CGGGATAATA CCATGACCAT AAATGAAGTA
AAAGTCACTG AAAAGCTTGA AGATACCATC GAAGGAATCT TAAATGGTGA TTCCGTTCTG
CTGGTAGATG GTTATGAACA GGTAATGGTT TTAAATACCA AGGGGTGGGA AAAAAGGTCA
GTCTCTGAAC CGGTTGTAGA ATCGGTAATC AGAGGACCTA GGGATGGTTT TACTGAGACC
CTTGCTGTTA ATACAGGTTT AATCAGGAGG AGAGTAAAAC ACCCCTCATT AAGGATTAAA
AATTATAATA TAGGACGCTT TTCAAAAACC AGTGTTTCTA TTTGTTACAT AGAGGGTATT
GCCAATAAAC ACCTTGTTGA AGAGGTAAAA GAGAGGATAA ATAATATAAA CATAGACAAT
ATCGGTAGTT CCGGTTTTGT AGAACAGTTA ATAGAGGATA GTCATTTATC ACCATTCCCC
CAGATATTGA GTACAGAACG GCCCGACCGG GTGGCTGCTA ACCTGATGGA GGGCCGGGTT
GCTGTCGTAG TTGATAACAC CCCGTTTGTT TTGATTCTAC CAATGACTAT CTCTATATTT
TTTCAAAGCC CGGAAGATTA CCATGAACGG TTTCTGGTGG CTAATTTTAT CAGGATTATA
AGGGGAATAG CTGCCTTTTT ATCCTTAACC TTACCATCTA TATATATTGC TCTGATATCA
TTCCATCCTG AAATGTTACC GACCCGACTG GCCCTTGCCT TTGCCGGTGG CAGGGGTATG
GTTCCTTTTC CCTCCTATCT GGAAGCCTTT ATAATGGAGG GTGCCATGGA ACTTTTAAGG
GAGGCCAGCA TCCGTCTTCC CAATCCCATT GGCCCTACTA TCGGTATTGT TGGGGCCCTG
ATTGTAGGTG AAGCTGCGGT CAGTGCCAGT ATTGTCAGCC CTTTTATGGT AATTATTGTG
GCTGTTACTA CCATTGCTTC TTTTACAATT CCCGACTACG GGAGTGCCAT TGCCCTCAGG
ATATTGAGGT TTCCCCTTAT GGTGGTGACG ACCATCTTTG GTCTCTATGG ACTTATCTGG
GGATTAATAG CCATAACCAT TCACCTGGCC AGCCTCAAGT CCTTCGGAAT CCCCTATTTA
ACCCCACTGG CCCCGTCCCG GTTATCTGAC CTGAAAGACC TGGTGGTCAG GGCACCCTTC
TGGTTAATGT ATAGACGACC TAAATATTTG CGGACTAAAG ATGAAAAGAG GTTTTCCTCA
AAAGGGGATG ATGACCAGAA TGAAAGAACA CGGTAA
|
|---|
| Protein sequence | MNWERIKERI DEIISSNTDR PGEKTSKKKL TRDIKKNEKT IEDIIGFSDD VNFREFKLGK
KLKIKATLIY IDSLVDKKTI NESILEPLFT EEFFSDNVEN LTTDDIVKFV RDNTMTINEV
KVTEKLEDTI EGILNGDSVL LVDGYEQVMV LNTKGWEKRS VSEPVVESVI RGPRDGFTET
LAVNTGLIRR RVKHPSLRIK NYNIGRFSKT SVSICYIEGI ANKHLVEEVK ERINNINIDN
IGSSGFVEQL IEDSHLSPFP QILSTERPDR VAANLMEGRV AVVVDNTPFV LILPMTISIF
FQSPEDYHER FLVANFIRII RGIAAFLSLT LPSIYIALIS FHPEMLPTRL ALAFAGGRGM
VPFPSYLEAF IMEGAMELLR EASIRLPNPI GPTIGIVGAL IVGEAAVSAS IVSPFMVIIV
AVTTIASFTI PDYGSAIALR ILRFPLMVVT TIFGLYGLIW GLIAITIHLA SLKSFGIPYL
TPLAPSRLSD LKDLVVRAPF WLMYRRPKYL RTKDEKRFSS KGDDDQNERT R
|
|---|
| |