Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_00060 |
Symbol | |
ID | 7314901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 5083 |
End bp | 7011 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643610409 |
Product | DNA gyrase, B subunit |
Protein accession | YP_002507764 |
Protein GI | 220930856 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 61 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTGAAG AAAGTTTTTT AAATAACAAA GGTAATTATG AAGCAGAGCA TATACAGGTT TTAGAGGGAT TAGAAGCAGT AAGAAAAAGG CCCGGGATGT ATATTGGGTC TACAGGAATG GATGGTCTCC ACCATCTTGT ATATGAGGTT GTAGATAATA GTATTGATGA GGCCATGCAG GGTTACTGTG ACTTGATAGA AGTTATTATA AAACCCGGTA ATATAATTAC AGTTAAAGAT AATGGCCGGG GAATCCCCGT AGACCCCCAT CCCAAACTTA AAAAACCAGC CGTTGAGGTG GTTTTAACCG TTCTCCATGC CGGAGGTAAG TTCGGAGGGG ATGGTTATAA GGTTTCAGGT GGTCTTCACG GAGTTGGTGT ATCTGTTGTC AATGCCCTGT CCAAATGGCT GGAAGTTGAG GTCTGCTGGC GGGATGGTAA GGTATACCAT CAAAAATATA ACAGGGGTAT CCCGGTATAT GACCTGAAGG TTATTGGTGA ATGTTCTGGA ACAGGGACTA CCATATCTTT TAAACCAGAT GAGGAAATCT TCGAAGATGT TAACTTTAAG TATAAGGTTC TGGCCCAGCG CTTAAAAGAA CTTGCCTTCC TGAATAAAGG GGTCAGAATT ATTTTAAGGG ATGAACGGGA AGAGGAGGCC CGTCAGGATG AGTATTGTTT TGAAGGGGGA TTAGTTTCTT TTGTTAAGTA TCTGAATAAG AATAAAAATC CCTTATTTGA TGAACCTTTT TACCTTGAGG AAAAGGATGA AAATAGAGAA GTAGAGATTG CAATCCAGTA CAATGATGGT TATGTTGATA GTATCTTTAC TTTTGCCAAT AATATAAATA CCCGGGAAGG TGGAACCCAT TTAAGTGGAT TTAAGAGTGC CTTAACCAGA ACTGTTAATG ACTATGCCCG GAGTAAGGGT ATTTTAAAAG AAAATGATGA AAATCTGACC GGGGAGGATA TCAGGGAAGG AATTACAGCT ATTATCAGTG TCAGGCTTAC AGATCCCCAG TTTGAGGGGC AGACCAAGAC CAAACTGGGT AATAGTGAAA TAAGGGGATT TGTTGATTCT GCCCTATCGA GTAATTTAAG GACCTTCCTT GAGGAAAACC CTAAAATAGG GAAGATAATT GTGGAAAAGG CCAGGAGTGC CGCCCGGGCC CGGAAAGCTG CCAAAAAAGC CCGGGAGCTC ACCAGGCGAA AAGGGGCCTT ATCAAATACA GCTTTACCGG GTAAACTGGC TGATTGTTCT TCCCGTGATA CTGAAAATAC CGAAATTTAT ATAGTTGAGG GGGATTCAGC CGGTGGTTCT GCTAAACAGG GCCGGGACCG GAAGTTCCAG GCCATCTTAC CGCTCCGGGG TAAGATTTTA AATGTAGAAA AGGCCAGATT GAATAAGATT CTCAACAATG AAGAAATAAG GGCCTTAATA ACAGCCATCG GAACCGGAAT TGGGGATGAA TTTGATATAA ATAAGGCCCG CTATGGCAAA ATAATTATAA TGACCGATGC CGATGTTGAT GGGGCCCATA TCAGGACCCT GTTGCTTACC TTTTTCTACA GGTATATGCG TCCTTTAATT GAAAATGGCA TGATATATAT AGCCCAGCCT CCCCTCTATA AGGTGAAAAA GGGGAGAAGG GAAGAGTATG TTTATAACGA CCGGGGTTTA CAAAAACTAC TCAATGACAT AGGACGTGAT AAAATAACCC TGCAGCGTTA CAAAGGTCTT GGAGAGATGA ACCCCGACCA GCTCTGGGAA ACTACCATGA ACCCTGAAAA CCGTATTATC CTCAAGGTCA AAATTGAGGA TGCGGTAGTA GCAGATGAGA CCTTTACTAC CCTCATGGGG GATAAGGTCC AGCCCAGGCG CGAATTTATT CAGGAACATG CCCATGAAGT TCAGAACCTG GATGTTTAA
|
Protein sequence | MAEESFLNNK GNYEAEHIQV LEGLEAVRKR PGMYIGSTGM DGLHHLVYEV VDNSIDEAMQ GYCDLIEVII KPGNIITVKD NGRGIPVDPH PKLKKPAVEV VLTVLHAGGK FGGDGYKVSG GLHGVGVSVV NALSKWLEVE VCWRDGKVYH QKYNRGIPVY DLKVIGECSG TGTTISFKPD EEIFEDVNFK YKVLAQRLKE LAFLNKGVRI ILRDEREEEA RQDEYCFEGG LVSFVKYLNK NKNPLFDEPF YLEEKDENRE VEIAIQYNDG YVDSIFTFAN NINTREGGTH LSGFKSALTR TVNDYARSKG ILKENDENLT GEDIREGITA IISVRLTDPQ FEGQTKTKLG NSEIRGFVDS ALSSNLRTFL EENPKIGKII VEKARSAARA RKAAKKAREL TRRKGALSNT ALPGKLADCS SRDTENTEIY IVEGDSAGGS AKQGRDRKFQ AILPLRGKIL NVEKARLNKI LNNEEIRALI TAIGTGIGDE FDINKARYGK IIIMTDADVD GAHIRTLLLT FFYRYMRPLI ENGMIYIAQP PLYKVKKGRR EEYVYNDRGL QKLLNDIGRD KITLQRYKGL GEMNPDQLWE TTMNPENRII LKVKIEDAVV ADETFTTLMG DKVQPRREFI QEHAHEVQNL DV
|
| |