| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_3486 |
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| Symbol | |
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| ID | 7312043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium cellulolyticum H10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011898 |
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| Strand | - |
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| Start bp | 4064426 |
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| End bp | 4065808 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 643610398 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_002507753 |
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| Protein GI | 220930844 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACATTG AAGATACAAT AGCGGCACTG TCAACACCAT ACGGAACAGG TGGAATTGGT
GTAATACGAA TTAGCGGAGG ACAGGCATTT GATACAGCAA ATAAAATATT TAGAAGTTCA
AAAACAATAG AGGAAATTCA TTCTCACACG GTAACATACG GAAAAATTGT GGATCCTAAA
CTTAACGATG TGGTAGACGA AGTATTATTG CTTAAAATGT GTAAGCCTAA CACTTTTACT
CGAGAAGATG TTATAGAAAT ACATTGTCAT GGCGGCATTG TTGTAGTGAA TCGTGTTCTT
GAATTGATCT TTAAGAATGG GGTAAGACCA GCACAACCAG GTGAGTTTAC AAAACGGGCA
TTTTTAAACG GAAGGATTGA TTTATCTCAG GCAGAGGCTA TAATAGACCT GATAAATTCA
AAGACCGTTG AAAGCTCAAA AGCTGCCGTG AGTCATTTGG AAGGTAGGTT ATCATTAAGA
CTAAAAAGCA TACGAGAAGT TTTAGTAGGA TTACTTGCCC ATATAGAGGT AACTGTTGAT
TATCCGGAAC ATGATATAGA AGAGATAACA GGTGAAAATG TATTAGAGAA TCTCATCAAG
ATAAAAGAGG AGCTTATCAC GCTGGCAGGA ACTTTTGAAA GAGGTAAGAT ATTACGGGAA
GGAATAGATA TAGTAATTGC CGGTAAGCCA AATGTAGGAA AATCTTCTTT ACTAAATCAG
TTATCCGGAA GTACCAAAGC TATCGTGACT GATATTCCGG GAACAACAAG AGATATTATT
GAAGAATATG TTAATATAAA GGGAATTCCT GCAAAAATTA TTGATACGGC AGGTATCAGA
AGTACAGAAG ATGTAGTGGA AACAATAGGT GTAAATAGGG CATATGAAGC CATTGAAAGT
GCTGATTTAA TAATTGCTGT TCTTTCAGCG GATACAGGGG TTACGGAAGA AGACATACAA
ATTTTAAAAA TGATAAAAAA TAAAAAAAGC TTGATTCTGA TTAACAAAAC TGATTTAGTA
GAAAAGAACA GTATTTCCAA AATAAAACAG CAGTTATCAG AATGTGATAT TGTATTGGAA
GCTTCAGTTA TTAAAGATGT AGGAATAGAA GAATTGGAAA CAGCAATATC TGGGTTATTT
ATAAAAGGAG ACATATCCAG TAACAACGAA GTTTTATTAA CAAATGCACG CCACAAATAT
CTTGTGGATA GAGCTATTAA TGATATTGAG CAGGCATTGA ATTCATTTGA AACAGGAATG
CCGCTGGATA TGGTGACAAT TGATATAAAA AGCTGTGCAG ACAGTATAGG TGAGATTACA
GGTGAATCTA TTGATGAAGC TGTTTTGCAT AATATATTTA GCCGTTTTTG CATAGGAAAG
TAA
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| Protein sequence | MYIEDTIAAL STPYGTGGIG VIRISGGQAF DTANKIFRSS KTIEEIHSHT VTYGKIVDPK
LNDVVDEVLL LKMCKPNTFT REDVIEIHCH GGIVVVNRVL ELIFKNGVRP AQPGEFTKRA
FLNGRIDLSQ AEAIIDLINS KTVESSKAAV SHLEGRLSLR LKSIREVLVG LLAHIEVTVD
YPEHDIEEIT GENVLENLIK IKEELITLAG TFERGKILRE GIDIVIAGKP NVGKSSLLNQ
LSGSTKAIVT DIPGTTRDII EEYVNIKGIP AKIIDTAGIR STEDVVETIG VNRAYEAIES
ADLIIAVLSA DTGVTEEDIQ ILKMIKNKKS LILINKTDLV EKNSISKIKQ QLSECDIVLE
ASVIKDVGIE ELETAISGLF IKGDISSNNE VLLTNARHKY LVDRAINDIE QALNSFETGM
PLDMVTIDIK SCADSIGEIT GESIDEAVLH NIFSRFCIGK
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