Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccel_3479 |
Symbol | |
ID | 7312036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium cellulolyticum H10 |
Kingdom | Bacteria |
Replicon accession | NC_011898 |
Strand | - |
Start bp | 4047107 |
End bp | 4048711 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643610389 |
Product | L-aspartate oxidase |
Protein accession | YP_002507747 |
Protein GI | 220930838 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0029] Aspartate oxidase |
TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAGAGG ATAGTAATAA GGTTGATGTT GAGGTCATAC ACAAGGATGT CGTCATCATT GGTAGCGGAA TAGCCGGAGT ATATACTGCA TTGGAAATAC CCGACAGTTT CCAGATAGGG ATAATTACCA AAGAGACACT GGACATAAGC AATTCAGTTC TCGCACAAGG GGGAATAGCA GTATCTCTTG ATGAGAAGAA TGATTCTCCA CAACTACATT TCAAAGATAC TCTTTTTGCA GGTGCAGGAT TAAATGATCA AAAGAGCGTA TGGGTTCTGG TAGAAGAGGC TGCTGAAAAT ATTAGAATTT TGTGCAGCCT AGGGGTAAAC TTTGATAAAA GCGGACAACA TCTATCCCTT ACTAGAGAAG GGGCCCATAG TGTAAATAGA ATTATTCACT CAGGAGATAC GACTGGTAAG GAAGTCTGTG ACAAGCTTAT TGAGGTTGCC CGGAGAAAGA AGAACATATC GATTTTTGAG AGTCACTTTG CAGTCGATCT TGTGATCGAA GAGGGCAAAT GCAAAGGTGT AATAGTTTAT GACGAAATTG AAGATAAAAT TAAGATATTT AAATCCGGCT CGGTAGTTGT TGCAACTGGG GGTTTTGGAC AGATTTATGC ACATACTACT AATCCTGAGG TCGCAACTGG TGACGGAGTC GGAATGTGTT TGAGAGCGGG TGCCCAGGCC ATGGATATGG AGTTTATACA GTTCCATCCT ACAGTACTAT ACCACCCAAA AGACAAGAGT TTCCTAATAT CTGAGGCGGT TAGAGGAGAG GGTGCTCAAC TTAAAAATAG CAACGGTGAG CCTTTTATGA AGAAATATCA CGAGTTGGGT GAACTGGCAC CCAGAGACAT TGTTTCAAGA GCGATTTTTA AAGAAATGTA TCTTACTGAT TCCAAAAATG TATTTCTGGA TATAACATTT AAAGGTAGGG AATATATCGA AAGTAGGTTT CCTAATATCT TTAAAACATG TCTGGATTAC GGTATTGATA TTTCTAAGGA TTTTATTCCG GTTGCTCCCG CAGAGCATTA TTGTATGGGG GGAGTAAAAA CAGATGTTGA CGGGCAGACA AATATTCCGG GTCTGTATGC ATGTGGAGAG GTAGCTTGTA CAGGGATTCA CGGTGCAAAC AGGCTCGCAA GCAATTCTTT GCTAGAAGGA CTGGTTTTCG GCAGGAAAAT CGCAAAGAAG ATCGAGTCCG AAGGAAGACC TTGTAATAAT TCAGCCGTCA ATTCAAGGCT CTGTTATGTA TCCAATAAAG AAAATGATGC GGCTCTTAAA TCTATGAAGG AAGAGATACA GGCTGCAATG ACAAAGTATG TAGGTATAAT CAGAAGTCAA CAAGGTCTTG AAAAGGCTGC CCAAATTATT AAAGATATTT ATAAGAAGTA CACGGATTTT ACAGGATTCA GTCTTGTAAA GCTGGAAGTG TTGAATATGC TTACAGTAGC GGGGCTTGTT ATAGAATCAG CTCTTGAAAG AAAAGAGAGC AGAGGTGCTC ATTATAGAAC AGACTACGAC AAAACTGATG ATACGAACTG GAGAAAAAAT ATAGTTAAGG AATTGGAGAA GGGAAAAATG GCTTCACCAT TTTAA
|
Protein sequence | MEEDSNKVDV EVIHKDVVII GSGIAGVYTA LEIPDSFQIG IITKETLDIS NSVLAQGGIA VSLDEKNDSP QLHFKDTLFA GAGLNDQKSV WVLVEEAAEN IRILCSLGVN FDKSGQHLSL TREGAHSVNR IIHSGDTTGK EVCDKLIEVA RRKKNISIFE SHFAVDLVIE EGKCKGVIVY DEIEDKIKIF KSGSVVVATG GFGQIYAHTT NPEVATGDGV GMCLRAGAQA MDMEFIQFHP TVLYHPKDKS FLISEAVRGE GAQLKNSNGE PFMKKYHELG ELAPRDIVSR AIFKEMYLTD SKNVFLDITF KGREYIESRF PNIFKTCLDY GIDISKDFIP VAPAEHYCMG GVKTDVDGQT NIPGLYACGE VACTGIHGAN RLASNSLLEG LVFGRKIAKK IESEGRPCNN SAVNSRLCYV SNKENDAALK SMKEEIQAAM TKYVGIIRSQ QGLEKAAQII KDIYKKYTDF TGFSLVKLEV LNMLTVAGLV IESALERKES RGAHYRTDYD KTDDTNWRKN IVKELEKGKM ASPF
|
| |