| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_3460 |
|---|
| Symbol | |
|---|
| ID | 7312018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 4028225 |
|---|
| End bp | 4030030 |
|---|
| Gene Length | 1806 bp |
|---|
| Protein Length | 601 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643610369 |
|---|
| Product | oligoendopeptidase F |
|---|
| Protein accession | YP_002507728 |
|---|
| Protein GI | 220930819 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1164] Oligoendopeptidase F |
|---|
| TIGRFAM ID | [TIGR00181] oligoendopeptidase F |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000449992 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTTCAG GAAAGACACT ACCCAAGAGA AAAGACATTG AGGAAAGGTT TAAATGGAAA
CTGGAGGATA TATATAAAGA TACGGATTCA TGGGAAAAAG ACTTTAAGCA AGTTAAGGAA
TTGGCGGCAC AAATGGTAAA CTTCAAGGGC AAGCTTGGAA ATAGTGCGGA TACACTGCTT
GATTGCTTCA AGAAAAGTGA TGAACTATTA TCTCTTAATG ATAAGGTCTT TGTTTATGCA
AGAATGAAGA GAGATGAGGA TAATGGAAAT TCAACCTACC AGGCGTTGAC AGAGAGAGCG
TCTACCCTTG CAACAGAGGT TTATGCCGCA ATTTCATTTG TTGTTCCCGA AATGCTCACA
ATACCCGAAG ACAAGCTTAT GTCTTTCTTG AATTCAAATA AGGAGCTTTC CGTGTACATG
TTCATGGTAC AGGAAAATTT GAGACAGAAG GAGCATATTT TAACTGAGAA GGAAGAACAG
ATTCTTGCAC TTTCAACTGA AATATCTGAC ACAGCAGGCG ACATCTTCAC CATGTACAAC
AATGCTGACA TAAAATTCCC CCACATACGG GACGAAGAAG GTGAGGAAAT AGAAGTTACC
AAAGGCAGAT ATACAACATT GATGGAAAGC AGGGACAGAA GAGTCCGTAA AGATGCTTTT
GAAGCCTTGT ACAGTACTTA CAGCAAAATG AAAAATACAC TTGGTGCATC ACTTACGGGA
AATGTAAAGA AAAACAGGTT TTATTCCGTT GTAAGAAACT ATCCTTCAGC TCTGGCAGCA
TCTCTGGATA ATGACAACGT TCCTGTAGAG GTTTATGATA ATCTTATAGA AACGGTTAAC
AAAAACCTGC ATTTATTGAA TAGATATTTA AAGCTGAGAA AAAAGGTATT AAAGCTGGAT
GCACTTCATA TGTACGATTT ATACGTTCCC ATGGTAGAAG AATACGACAA GAAGGTTACC
TATGAGGAAG CCAAGAAAAT TGTACAAGAA GGACTACAGC CGCTCGGTGA GGAATACATC
GGATATCTTA AAAAGGGTTT GAATTCGGGA TGGATTGATA TTTATGAAAA TGAAGGCAAA
ACCAGCGGAG CATATGCATG GGGTACTTAT AAAACACATC CCTATGTGCT GCTCAACTAT
CAGGACAACA TAAATGATGT GTATACTCTG ACACATGAAA TGGGACATGC ACTGCACTCA
TACTATACCA ATATGACTCA GCCTTACGTT TATTCTGAAT ACAGGATATT TGTTGCAGAG
GTCGCCTCAA CAGTGAATGA ATCACTGCTC ATGAGGTATA TGTTATCAAA ATCAGAGAGC
AAACAAGAGA AAGCATATTT GTTGAACCAT TATCTTGAGG AGTTCAGGGG GACAGTATTC
AGACAGACAA TGTTCGCAGA ATTTGAAAAG CTGATACACC AAAAGACCGA ACAGGGAGAG
GCACTAAACG CACAGGAACT TTGTGATATT TACTATGACT TGAACAAAAA ATATTTTGGA
GAAACAGTTG ACGTTGATGA GGAAATTGCA ATGGAATGGT CAAGAATTCC GCACTTCTAC
AGTAGTTTTT ACGTATATAA ATATGCCACA GGCTTCTCAG CTGCAACTGC TATTGCAGAA
AAAATTTATA AAGAAGGTAA GCCAGCGGTT GATAAATATC TGGAGTTCCT TAAAGGCGGA
GGCTCTAACT ATCCCCTGGA GCTTTTAAAA ATAGCCGGTG TAGACCTTTC TTCACCGAAG
CCCATAGAAG ATGCCTTAAA TGTATTTGAA AAGACTTTGG AAGAGCTGGA AGAACTTTTA
GTATAA
|
|---|
| Protein sequence | MTSGKTLPKR KDIEERFKWK LEDIYKDTDS WEKDFKQVKE LAAQMVNFKG KLGNSADTLL
DCFKKSDELL SLNDKVFVYA RMKRDEDNGN STYQALTERA STLATEVYAA ISFVVPEMLT
IPEDKLMSFL NSNKELSVYM FMVQENLRQK EHILTEKEEQ ILALSTEISD TAGDIFTMYN
NADIKFPHIR DEEGEEIEVT KGRYTTLMES RDRRVRKDAF EALYSTYSKM KNTLGASLTG
NVKKNRFYSV VRNYPSALAA SLDNDNVPVE VYDNLIETVN KNLHLLNRYL KLRKKVLKLD
ALHMYDLYVP MVEEYDKKVT YEEAKKIVQE GLQPLGEEYI GYLKKGLNSG WIDIYENEGK
TSGAYAWGTY KTHPYVLLNY QDNINDVYTL THEMGHALHS YYTNMTQPYV YSEYRIFVAE
VASTVNESLL MRYMLSKSES KQEKAYLLNH YLEEFRGTVF RQTMFAEFEK LIHQKTEQGE
ALNAQELCDI YYDLNKKYFG ETVDVDEEIA MEWSRIPHFY SSFYVYKYAT GFSAATAIAE
KIYKEGKPAV DKYLEFLKGG GSNYPLELLK IAGVDLSSPK PIEDALNVFE KTLEELEELL
V
|
|---|
| |