| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ccel_3425 |
|---|
| Symbol | |
|---|
| ID | 7311987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium cellulolyticum H10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011898 |
|---|
| Strand | - |
|---|
| Start bp | 3986585 |
|---|
| End bp | 3987544 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643610334 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
|---|
| Protein accession | YP_002507693 |
|---|
| Protein GI | 220930784 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATAG TTGTATTAGA CGGATATACA CTGAATCCGG GAGACATATC CTGGGATGCA
ATGGGACAGC TTGGGGAGTT GGTGGTATAC GACAGAACAC CTGCCGAAAA AATAATTGAA
AGAATAGATA ATGCAGAAAT AGTTCTTACA AACAAAGTAA ATCTTACAAA GGATATATTA
GAGAAAACAC CATCGGTTAA ATATATTGGT GTTATGGCAA CGGGATATAA TGTAGTAGAT
ACTGAATATG CAAAAGAAAT TGGCATAGTT GTCACAAATG TACCAGCCTA CAGTACCGAT
TCCGTAGCAC AACTGGTATT TGCATTTATA TTGGAATTTT GCCACCATGT AGGAGAACAC
AGCAGGGTTG TCCATGAAGG AAAATGGACA AAAAGTCATG ATTTTTCATT CTGGGATTAT
CCTCTTATAG AAATAAAGAA TAAAACACTA GGTATAATCG GATTTGGTGC AATAGGTCAA
AAAGTAGCTC AAATAGCGTG TGCTTTTGGT ATGGAGGTAT TATGTTATAG CAGGACTCAA
AAACCCGACT ATGAAAATGA AAATATAAAA TTCGCACCCT TTGATGACGT GCTAGCAAAG
TCAGATTTTA TTAGTTTGCA TTGTCCGCTC ACTGAAGAGA CAAAAGGATT AATAAATAAG
AAGGCAATAT CTAAAATGAA GGAAGGGGCA TTTCTGATAA ATACGTCAAG AGGTCCTGTT
ATAAACGAGC AAAATGTGGC AGAGGCTTTA AATACCGGAA GACTTGCCGG ACTGGGAACA
GATGTAGTGT CTGTAGAGCC TATACAAGTG GATAATCCAC TGCTTAGTGC AAAAAACTGT
ATAATTACAC CGCATTTTGC ATGGGCTCCT AAAGAAGCCA GGAACCGACT TATGAATACA
TTAATAAGTA ACATCATAGC CTTTATAGAA AAGAATCCTG TAAATGTAGT AAATAGGTAG
|
|---|
| Protein sequence | MKIVVLDGYT LNPGDISWDA MGQLGELVVY DRTPAEKIIE RIDNAEIVLT NKVNLTKDIL
EKTPSVKYIG VMATGYNVVD TEYAKEIGIV VTNVPAYSTD SVAQLVFAFI LEFCHHVGEH
SRVVHEGKWT KSHDFSFWDY PLIEIKNKTL GIIGFGAIGQ KVAQIACAFG MEVLCYSRTQ
KPDYENENIK FAPFDDVLAK SDFISLHCPL TEETKGLINK KAISKMKEGA FLINTSRGPV
INEQNVAEAL NTGRLAGLGT DVVSVEPIQV DNPLLSAKNC IITPHFAWAP KEARNRLMNT
LISNIIAFIE KNPVNVVNR
|
|---|
| |